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second README.md version
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alvaro authored and alvaro committed Aug 9, 2018
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Expand Up @@ -72,7 +72,7 @@ perl compare_clusters.pl -m -o intersection -d \

## Effect on the clustering

_1) Protein datasets_
__1) Protein datasets__

Sequence clusters produced by the standard and the normalized version of GET_HOMOLOGUES-EST
on the peptides of 119 isolates of the bacterial Streptophomonas genus showed some differences.
Expand All @@ -98,7 +98,7 @@ the normalization process in different length regions. Positive values indicate
after removing a sequence after normalization. Length was measured as the mean alignment length
reported by BLASTP for sequences within the cluster.*

_2) Nucleotide datasets_
__2) Nucleotide datasets__

The clusters sets produced by the standard and normalized predictions by the
GET_HOMOLOGUES-EST protocol were very different with the transcripts of 11 species of the genus Oryza.
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