PBM: fix merge conflict and OPENMP compile time Error#1704

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dustinma324 wants to merge 60 commits intoerf-model:developmentfrom dustinma324:perturbation_box_method

+33-26

Commits on Jun 25, 2024

Generalized size of boxes. Start implementing CPB. Still need user input + .rst documentation
Ting-Hsuan (Dustin) Ma
committed
Added my own folder in Exec, ABL_perturbation_inflow
Ting-Hsuan (Dustin) Ma
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Generalized BPM so it can transform into CPM. Added more user input variables. Renamed BPM and CPM tags to source and direct to keep neutrality. Need to add Ec, tp, and cell_data equations for dire…
Ting-Hsuan (Dustin) Ma
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Merge branch 'development' into perturbation_box_method
Ting-Hsuan (Dustin) Ma
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manually got rid of tabs
Ting-Hsuan (Dustin) Ma
committed

Commits on Jun 26, 2024

added in calc_tpi_meanMag_firstCell() function and direct field add within TimeIntegration/ERF_Advance.cpp for CPM cases. Need to implement options to swap back and forth on use side between BPM an…
Ting-Hsuan (Dustin) Ma
committed

Commits on Jun 27, 2024

Commits on Jun 28, 2024

Added output format into file + verbose tags. Fixed parallel issue of boxes. Added in perturbation inflow .rst documents. CONTINUE with CPM debug, fast_rhs_fun debug with PB.
Ting-Hsuan (Dustin) Ma
committed
Added output format into file + verbose tags. Fixed parallel issue of boxes. Added in perturbation inflow .rst documents. CONTINUE with CPM debug, fast_rhs_fun debug with PB.
Ting-Hsuan (Dustin) Ma
committed
Merge branch 'development' into perturbation_box_method. Added output format into file + verbose tags. Fixed parallel issue of boxes. Added in perturbation inflow .rst documents. CONTINUE with CPM …
Ting-Hsuan (Dustin) Ma
committed
Get rid of trailing white space. Added output format into file + verbose tags. Fixed parallel issue of boxes. Added in perturbation inflow .rst documents. CONTINUE with CPM debug, fast_rhs_fun debu…
Ting-Hsuan (Dustin) Ma
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update DOI links for build-and-deploy fail test.
Ting-Hsuan (Dustin) Ma
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404 Client Error: Not Found for url error fix.
Ting-Hsuan (Dustin) Ma
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404 Client Error: Not Found for url error fix.
Ting-Hsuan (Dustin) Ma
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404 Client Error: Not Found for url error fix.
Ting-Hsuan (Dustin) Ma
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Error 403 with Munoz-Esparza 2015 paper. Last attempt
Ting-Hsuan (Dustin) Ma
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Added in perturbation inflow .rst documents. CONTINUE with pb tests. Currently blows up after 1st update interval.
Ting-Hsuan (Dustin) Ma
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fix for doc push
Ting-Hsuan (Dustin) Ma
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Commits on Jul 1, 2024

manual rerun for DOI link in docs
Ting-Hsuan (Dustin) Ma
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link replacement for syntax error
Ting-Hsuan (Dustin) Ma
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manual check for munoz link
Ting-Hsuan (Dustin) Ma
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what is going on with these links?
Ting-Hsuan (Dustin) Ma
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using link I know that works
Ting-Hsuan (Dustin) Ma
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testing DeLeon link
Ting-Hsuan (Dustin) Ma
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DeLeon: maybe it's a syntax error?
Ting-Hsuan (Dustin) Ma
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DeLeon: Trying the other way of linking
Ting-Hsuan (Dustin) Ma
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maybe special character problem?
Ting-Hsuan (Dustin) Ma
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commented out links to DeLeon et al. (2018), and Munoz-Esparza et al. (2015). DOI links return Erorror 403, actual link returns Error 404.
Ting-Hsuan (Dustin) Ma
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Commits on Jul 2, 2024

testing perturbation inflow method, qualitativly for now
Ting-Hsuan (Dustin) Ma
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Added trigger tags for PBM in ERF.cpp. This should fix compile error in workflow.
Ting-Hsuan (Dustin) Ma
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Document update
Ting-Hsuan (Dustin) Ma
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Docs update + merge
Ting-Hsuan (Dustin) Ma
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Commits on Jul 3, 2024

resolved erroneous error with pseduo gravity (ignores scales with mechancial perturbation)
Ting-Hsuan (Dustin) Ma
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resolved erroneous error with pseduo gravity (ignores scales with mechancial perturbation)
Ting-Hsuan (Dustin) Ma
committed

Commits on Jul 10, 2024

updating PR
Ting-Hsuan (Dustin) Ma
committed
fixing codespell
Ting-Hsuan (Dustin) Ma
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resolve merge conflict
Ting-Hsuan (Dustin) Ma
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corrected math mode in .rst file
Ting-Hsuan (Dustin) Ma
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Commits on Jul 12, 2024

modifying test files
Ting-Hsuan (Dustin) Ma
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fixed merge conflict
Ting-Hsuan (Dustin) Ma
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got rid of some weird merge conflict HEAD that remained
Ting-Hsuan (Dustin) Ma
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Commits on Jul 16, 2024

Merge branch 'development' into perturbation_box_method
Ting-Hsuan (Dustin) Ma
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Should not be using sounding with incompressible flow, as it is a compressible flow algorithm.
Ting-Hsuan (Dustin) Ma
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fix to input tag
Ting-Hsuan (Dustin) Ma
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Merge branch 'development' into perturbation_box_method
Ting-Hsuan (Dustin) Ma
committed

Commits on Jul 17, 2024

reworked apply_tpi() logic so it is now a per cell within PB assignment. Random assignment happens at the calc_tpi_update() level
Ting-Hsuan (Dustin) Ma
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white space fix
Ting-Hsuan (Dustin) Ma
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fixed unsed variable error for CI tests
Ting-Hsuan (Dustin) Ma
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Commits on Jul 18, 2024

Merge branch 'development' into perturbation_box_method
dustinma324
authored

Commits on Jul 19, 2024

Merging to grab inflow dirichlet setup
Ting-Hsuan (Dustin) Ma
committed
changed input file. modified python file to generate ReTau180, and generate dirichlet input file. Added more description into documentation.
Ting-Hsuan (Dustin) Ma
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init perturbation in initialization to see if turbulence is sustained
Ting-Hsuan (Dustin) Ma
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Commits on Jul 22, 2024

Box perturbation method working with incompressible solver.
Ting-Hsuan (Dustin) Ma
committed
Merge branch 'development' into perturbation_box_method
Ting-Hsuan (Dustin) Ma
committed
fixed codespell
Ting-Hsuan (Dustin) Ma
committed
fixed white space
Ting-Hsuan (Dustin) Ma
committed

Commits on Jul 23, 2024

fixing OPENMP RegTest
Ting-Hsuan (Dustin) Ma
committed
fix merge conflict and OPENMP compile time Error
Ting-Hsuan (Dustin) Ma
committed
fix merge conflict, OPENMP compile time Error, and trailing white space
Ting-Hsuan (Dustin) Ma
committed