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erf-model · Jan 15, 2025 · 393027a · 393027a
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diff --git a/ERF_8H_source.html b/ERF_8H_source.html
@@ -1673,7 +1673,7 @@
 <div class="ttc" id="aclassERF_html_a54e37988486ef96e55e84bd8e91bb688"><div class="ttname"><a href="classERF.html#a54e37988486ef96e55e84bd8e91bb688">ERF::rV_new</a></div><div class="ttdeci">amrex::Vector&lt; amrex::MultiFab &gt; rV_new</div><div class="ttdef"><b>Definition:</b> ERF.H:762</div></div>
 <div class="ttc" id="aclassERF_html_a54f6c5d799e51521ad10bb57d29d0c44"><div class="ttname"><a href="classERF.html#a54f6c5d799e51521ad10bb57d29d0c44">ERF::PlotFileName</a></div><div class="ttdeci">std::string PlotFileName(int lev) const</div></div>
 <div class="ttc" id="aclassERF_html_a55eae94c5363e227b571739738bb26b7"><div class="ttname"><a href="classERF.html#a55eae94c5363e227b571739738bb26b7">ERF::write_1D_profiles</a></div><div class="ttdeci">void write_1D_profiles(amrex::Real time)</div><div class="ttdef"><b>Definition:</b> ERF_Write1DProfiles.cpp:15</div></div>
-<div class="ttc" id="aclassERF_html_a5600f8ce250d4811012719fdf5e85f00"><div class="ttname"><a href="classERF.html#a5600f8ce250d4811012719fdf5e85f00">ERF::initialize_integrator</a></div><div class="ttdeci">void initialize_integrator(int lev, amrex::MultiFab &amp;cons_mf, amrex::MultiFab &amp;vel_mf)</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewArrays.cpp:576</div></div>
+<div class="ttc" id="aclassERF_html_a5600f8ce250d4811012719fdf5e85f00"><div class="ttname"><a href="classERF.html#a5600f8ce250d4811012719fdf5e85f00">ERF::initialize_integrator</a></div><div class="ttdeci">void initialize_integrator(int lev, amrex::MultiFab &amp;cons_mf, amrex::MultiFab &amp;vel_mf)</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewArrays.cpp:590</div></div>
 <div class="ttc" id="aclassERF_html_a56a23d298bc66218bf257d0e793e341f"><div class="ttname"><a href="classERF.html#a56a23d298bc66218bf257d0e793e341f">ERF::thin_zforce</a></div><div class="ttdeci">amrex::Vector&lt; std::unique_ptr&lt; amrex::MultiFab &gt; &gt; thin_zforce</div><div class="ttdef"><b>Definition:</b> ERF.H:907</div></div>
 <div class="ttc" id="aclassERF_html_a56ae431ddda8577a797dd939e53a593a"><div class="ttname"><a href="classERF.html#a56ae431ddda8577a797dd939e53a593a">ERF::init_type</a></div><div class="ttdeci">static InitType init_type</div><div class="ttdef"><b>Definition:</b> ERF.H:1057</div></div>
 <div class="ttc" id="aclassERF_html_a574521986a6e403159f83c8b8123ba90"><div class="ttname"><a href="classERF.html#a574521986a6e403159f83c8b8123ba90">ERF::domain_bcs_type</a></div><div class="ttdeci">amrex::Vector&lt; amrex::BCRec &gt; domain_bcs_type</div><div class="ttdef"><b>Definition:</b> ERF.H:883</div></div>
@@ -1704,7 +1704,7 @@
 <div class="ttc" id="aclassERF_html_a6600f30f1043a4c5e62b5cdd05f0a99f"><div class="ttname"><a href="classERF.html#a6600f30f1043a4c5e62b5cdd05f0a99f">ERF::stretched_dz_d</a></div><div class="ttdeci">amrex::Vector&lt; amrex::Gpu::DeviceVector&lt; amrex::Real &gt; &gt; stretched_dz_d</div><div class="ttdef"><b>Definition:</b> ERF.H:865</div></div>
 <div class="ttc" id="aclassERF_html_a6837423e9248e923fcaa1987b59d8160"><div class="ttname"><a href="classERF.html#a6837423e9248e923fcaa1987b59d8160">ERF::t_avg_cnt</a></div><div class="ttdeci">amrex::Vector&lt; amrex::Real &gt; t_avg_cnt</div><div class="ttdef"><b>Definition:</b> ERF.H:740</div></div>
 <div class="ttc" id="aclassERF_html_a6865cf87abbb5aab0db00ff3b1ce94ac"><div class="ttname"><a href="classERF.html#a6865cf87abbb5aab0db00ff3b1ce94ac">ERF::plot_var_names_1</a></div><div class="ttdeci">amrex::Vector&lt; std::string &gt; plot_var_names_1</div><div class="ttdef"><b>Definition:</b> ERF.H:964</div></div>
-<div class="ttc" id="aclassERF_html_a691172d44ab3e8b4d6fb18c068cc1ab4"><div class="ttname"><a href="classERF.html#a691172d44ab3e8b4d6fb18c068cc1ab4">ERF::remake_zphys</a></div><div class="ttdeci">void remake_zphys(int lev, amrex::Real time, std::unique_ptr&lt; amrex::MultiFab &gt; &amp;temp_zphys_nd)</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewArrays.cpp:530</div></div>
+<div class="ttc" id="aclassERF_html_a691172d44ab3e8b4d6fb18c068cc1ab4"><div class="ttname"><a href="classERF.html#a691172d44ab3e8b4d6fb18c068cc1ab4">ERF::remake_zphys</a></div><div class="ttdeci">void remake_zphys(int lev, amrex::Real time, std::unique_ptr&lt; amrex::MultiFab &gt; &amp;temp_zphys_nd)</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewArrays.cpp:544</div></div>
 <div class="ttc" id="aclassERF_html_a69a3f925e95ec4244b0257f9de16d65a"><div class="ttname"><a href="classERF.html#a69a3f925e95ec4244b0257f9de16d65a">ERF::m_check_int</a></div><div class="ttdeci">int m_check_int</div><div class="ttdef"><b>Definition:</b> ERF.H:961</div></div>
 <div class="ttc" id="aclassERF_html_a6b1d727e63de2e49aa4f8e00b0dda1d5"><div class="ttname"><a href="classERF.html#a6b1d727e63de2e49aa4f8e00b0dda1d5">ERF::estTimeStep</a></div><div class="ttdeci">amrex::Real estTimeStep(int lev, long &amp;dt_fast_ratio) const</div><div class="ttdef"><b>Definition:</b> ERF_ComputeTimestep.cpp:55</div></div>
 <div class="ttc" id="aclassERF_html_a6c570cbcb63ba3b0b09557537310ea46"><div class="ttname"><a href="classERF.html#a6c570cbcb63ba3b0b09557537310ea46">ERF::sponge_type</a></div><div class="ttdeci">static std::string sponge_type</div><div class="ttdef"><b>Definition:</b> ERF.H:1061</div></div>
@@ -1725,7 +1725,7 @@
 <div class="ttc" id="aclassERF_html_a7c448670f7a5cadd6fe56f7e615c9eb6"><div class="ttname"><a href="classERF.html#a7c448670f7a5cadd6fe56f7e615c9eb6">ERF::output_bndry_planes</a></div><div class="ttdeci">static int output_bndry_planes</div><div class="ttdef"><b>Definition:</b> ERF.H:1103</div></div>
 <div class="ttc" id="aclassERF_html_a7d245afb7b3236b5967902f50bf9000b"><div class="ttname"><a href="classERF.html#a7d245afb7b3236b5967902f50bf9000b">ERF::d_v_geos</a></div><div class="ttdeci">amrex::Vector&lt; amrex::Gpu::DeviceVector&lt; amrex::Real &gt; &gt; d_v_geos</div><div class="ttdef"><b>Definition:</b> ERF.H:1128</div></div>
 <div class="ttc" id="aclassERF_html_a7d54d3f2317d06a8dfcde4f65cfc3e92"><div class="ttname"><a href="classERF.html#a7d54d3f2317d06a8dfcde4f65cfc3e92">ERF::last_plot_file_step_1</a></div><div class="ttdeci">int last_plot_file_step_1</div><div class="ttdef"><b>Definition:</b> ERF.H:909</div></div>
-<div class="ttc" id="aclassERF_html_a7dba7f9e6bd3f6898fac9ac2efcec692"><div class="ttname"><a href="classERF.html#a7dba7f9e6bd3f6898fac9ac2efcec692">ERF::update_terrain_arrays</a></div><div class="ttdeci">void update_terrain_arrays(int lev)</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewArrays.cpp:565</div></div>
+<div class="ttc" id="aclassERF_html_a7dba7f9e6bd3f6898fac9ac2efcec692"><div class="ttname"><a href="classERF.html#a7dba7f9e6bd3f6898fac9ac2efcec692">ERF::update_terrain_arrays</a></div><div class="ttdeci">void update_terrain_arrays(int lev)</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewArrays.cpp:579</div></div>
 <div class="ttc" id="aclassERF_html_a7e9040f32464f1a6dee6e0384393451d"><div class="ttname"><a href="classERF.html#a7e9040f32464f1a6dee6e0384393451d">ERF::nc_bdy_file</a></div><div class="ttdeci">static std::string nc_bdy_file</div><div class="ttdef"><b>Definition:</b> ERF.H:1071</div></div>
 <div class="ttc" id="aclassERF_html_a7eac012575590fe374a8d4b5d9061546"><div class="ttname"><a href="classERF.html#a7eac012575590fe374a8d4b5d9061546">ERF::metgrid_interp_theta</a></div><div class="ttdeci">bool metgrid_interp_theta</div><div class="ttdef"><b>Definition:</b> ERF.H:1085</div></div>
 <div class="ttc" id="aclassERF_html_a7ef14f6028b577eba70aef46b508be19"><div class="ttname"><a href="classERF.html#a7ef14f6028b577eba70aef46b508be19">ERF::nc_init_file</a></div><div class="ttdeci">static amrex::Vector&lt; amrex::Vector&lt; std::string &gt; &gt; nc_init_file</div><div class="ttdef"><b>Definition:</b> ERF.H:1068</div></div>
@@ -1833,7 +1833,7 @@
 <div class="ttc" id="aclassERF_html_ac4497025ab94461899960ee067c2c72a"><div class="ttname"><a href="classERF.html#ac4497025ab94461899960ee067c2c72a">ERF::FillCoarsePatch</a></div><div class="ttdeci">void FillCoarsePatch(int lev, amrex::Real time)</div><div class="ttdef"><b>Definition:</b> ERF_FillCoarsePatch.cpp:21</div></div>
 <div class="ttc" id="aclassERF_html_ac44e400a7ce68e18fa44e9416cb1344e"><div class="ttname"><a href="classERF.html#ac44e400a7ce68e18fa44e9416cb1344e">ERF::ClearLevel</a></div><div class="ttdeci">void ClearLevel(int lev) override</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewLevel.cpp:484</div></div>
 <div class="ttc" id="aclassERF_html_ac81b3dfd7c6f21ba8479834e2ff1e652"><div class="ttname"><a href="classERF.html#ac81b3dfd7c6f21ba8479834e2ff1e652">ERF::ref_tags</a></div><div class="ttdeci">static amrex::Vector&lt; amrex::AMRErrorTag &gt; ref_tags</div><div class="ttdef"><b>Definition:</b> ERF.H:1173</div></div>
-<div class="ttc" id="aclassERF_html_ac81ec7f74a1be1c4a1e6e15e08385ed5"><div class="ttname"><a href="classERF.html#ac81ec7f74a1be1c4a1e6e15e08385ed5">ERF::make_physbcs</a></div><div class="ttdeci">void make_physbcs(int lev)</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewArrays.cpp:598</div></div>
+<div class="ttc" id="aclassERF_html_ac81ec7f74a1be1c4a1e6e15e08385ed5"><div class="ttname"><a href="classERF.html#ac81ec7f74a1be1c4a1e6e15e08385ed5">ERF::make_physbcs</a></div><div class="ttdeci">void make_physbcs(int lev)</div><div class="ttdef"><b>Definition:</b> ERF_MakeNewArrays.cpp:612</div></div>
 <div class="ttc" id="aclassERF_html_ac94ddee2f501dbcea2a516284b7119b5"><div class="ttname"><a href="classERF.html#ac94ddee2f501dbcea2a516284b7119b5">ERF::d_w_subsid</a></div><div class="ttdeci">amrex::Vector&lt; amrex::Gpu::DeviceVector&lt; amrex::Real &gt; &gt; d_w_subsid</div><div class="ttdef"><b>Definition:</b> ERF.H:1122</div></div>
 <div class="ttc" id="aclassERF_html_ac9a11403c2238d0d1e7b65b2d100dbaf"><div class="ttname"><a href="classERF.html#ac9a11403c2238d0d1e7b65b2d100dbaf">ERF::FPr_w</a></div><div class="ttdeci">amrex::Vector&lt; ERFFillPatcher &gt; FPr_w</div><div class="ttdef"><b>Definition:</b> ERF.H:807</div></div>
 <div class="ttc" id="aclassERF_html_acab120bb9324e7298534d765c447d703"><div class="ttname"><a href="classERF.html#acab120bb9324e7298534d765c447d703">ERF::real_set_width</a></div><div class="ttdeci">int real_set_width</div><div class="ttdef"><b>Definition:</b> ERF.H:1073</div></div>