Use single quotes in database queries

[nsoranzo]

Fix the following error when using SQLite 3.44.1:

sqlite3.OperationalError: no such column: "latimeria chalumnae" - should this be a string literal in single-quotes?

Successfully tested with $ pytest tests/test_ncbiquery.py

[conchoecia]

I ran into the same issue, this is the relevant section of the traceback from a simple query:

    taxid2name = ncbi.get_taxid_translator([9606, 9443])
                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/path/to/lib/python3.12/site-packages/ete3/ncbi_taxonomy/ncbiquery.py", line 268, in get_taxid_translator
    result = self.db.execute(cmd)
             ^^^^^^^^^^^^^^^^^^^^
sqlite3.OperationalError: no such column: "9443" - should this be a string literal in single-quotes?

This is my sqlite version:

conda list sqlite

# Name                    Version                   Build  Channel
libsqlite                 3.49.1               hee588c1_1    conda-forge

[jordibc]

Thanks @nsoranzo and @conchoecia !
This is indeed related with a change of behavior of sqlite3. We have just updated ete to fix it. Hopefully it works for you now, if not, feel free to reopen this issue.