.github/workflows/import_truth.yml #9
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name: "ImportTruthErviss" | |
on: | |
workflow_dispatch: | |
# scheduled run every Friday at 19.00 (18.00 UTC) | |
schedule: | |
- cron: '00 18 * * 5' | |
jobs: | |
import_truth_job: | |
if: github.repository_owner == 'european-modelling-hubs' | |
runs-on: ubuntu-latest | |
outputs: | |
changed_files: ${{ steps.import_truth.outputs.imported_files }} | |
steps: | |
# Checkout the python tools repo | |
# ------------------------------------------- | |
- name: checkout python tools repo | |
uses: actions/checkout@v3 | |
with: | |
token: ${{ secrets.GITHUB_TOKEN }} | |
repository: 'european-modelling-hubs/hub-tools' | |
ref: 'main' | |
path: './tools/' | |
# Checkout the data repository | |
# ------------------------------------------- | |
- name: checkout data repo | |
uses: actions/checkout@v3 | |
with: | |
token: ${{ secrets.GITHUB_TOKEN }} | |
repository: 'european-modelling-hubs/flu-forecast-hub' | |
ref: 'main' | |
path: './repo/' | |
# Run Pyton code | |
# ------------------------- | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: '3.10' | |
- run: pip install pycountry isoweek | |
- name: Import Truth | |
id: import_truth | |
run: | | |
python ./tools/code/import_truth.py --hub_path ./repo --disease_name "ILI" | |
- name: Commit data repo changes | |
uses: EndBug/add-and-commit@v7 | |
with: | |
cwd: './repo' | |
message: "Updating Truth Data repo ..." | |
default_author: github_actions | |
push: true | |
call-persisting-wf: | |
needs: import_truth_job | |
uses: european-modelling-hubs/flu-forecast-hub/.github/workflows/persist_changes.yml@main | |
with: | |
changes-list: ${{ needs.import_truth_job.outputs.changed_files }} | |
secrets: | |
envPAT: ${{ secrets.GITHUB_TOKEN }} |