First commit.

TABLE.txt

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+#--------------------------------------------------
+#  This is a table of theoretical estimation 
+#  of mean degree, given edit distance, error rate, and coverage
+#  It is pre-compted using 
+#  ./scripts/theor_est.r
+#-------------------------------------------------- 
+#Cv dis error   th.avg  th.sd   emp.avg emp.std
+10	0	0	0.28	0.52	0.28	0.52	
+10	0	0.1	0.26	0.51	0.26	0.5	
+10	0	0.5	0.19	0.45	0.19	0.45	
+10	0	1	0.13	0.38	0.13	0.37	
+10	0	2	0.06	0.26	0.06	0.26	
+10	0	4	0.01	0.12	0.02	0.13	
+10	2	0	0.83	0.91	0.84	0.92	
+10	2	0.1	0.79	0.9	0.8	0.88	
+10	2	0.5	0.66	0.83	0.67	0.84	
+10	2	1	0.54	0.76	0.54	0.75	
+10	2	2	0.36	0.62	0.37	0.63	
+10	2	4	0.16	0.41	0.17	0.44	
+10	4	0	1.39	1.18	1.39	1.18	
+10	4	0.1	1.35	1.16	1.35	1.15	
+10	4	0.5	1.22	1.12	1.23	1.13	
+10	4	1	1.08	1.06	1.1	1.06	
+10	4	2	0.86	0.96	0.89	0.97	
+10	4	4	0.52	0.76	0.56	0.79	
+10	6	0	1.94	1.39	1.94	1.39	
+10	6	0.1	1.91	1.38	1.91	1.37	
+10	6	0.5	1.77	1.34	1.8	1.35	
+10	6	1	1.64	1.29	1.66	1.28	
+10	6	2	1.41	1.21	1.45	1.22	
+10	6	4	1.03	1.05	1.1	1.09	
+35	6	0	6.32	2.13	6.32	2.13	
+35	6	1	5.49	2.22	5.49	2.22	
+35	6	2	4.82	2.21	4.82	2.21	
+35	6	4	3.56	2.1	3.56	2.1	
+50	0	0	1.39	1.18	1.39	1.19	
+50	0	0.1	1.29	1.16	1.29	1.17	
+50	0	0.5	0.97	1.07	0.97	1.07	
+50	0	1	0.67	0.93	0.68	0.93	
+50	0	2	0.32	0.66	0.32	0.66	
+50	0	4	0.07	0.3	0.07	0.3	
+50	2	0	4.17	2.04	4.17	2.04	
+50	2	0.1	3.97	2.05	3.97	2.05	
+50	2	0.5	3.32	2.02	3.34	2.02	
+50	2	1	2.69	1.9	2.75	1.9	
+50	2	2	1.8	1.61	1.85	1.63	
+50	2	4	0.78	1.08	0.81	1.1	
+50	4	0	6.94	2.63	6.95	2.63	
+50	4	0.1	6.75	2.64	6.75	2.62	
+50	4	0.5	6.09	2.62	6.15	2.63	
+50	4	1	5.41	2.55	5.54	2.55	
+50	4	2	4.31	2.39	4.48	2.42	
+50	4	4	2.59	2.02	2.75	2.07	
+50	6	0	9.72	3.12	9.73	3.12	
+50	6	0.1	9.53	3.12	9.54	3.11	
+50	6	0.5	8.86	3.11	8.97	3.1	
+50	6	1	8.19	3.05	8.38	3.04	
+50	6	2	7.07	2.93	7.34	2.96	
+50	6	4	5.13	2.7	5.49	2.76	
+100	0	0	2.78	1.67	2.77	1.66	
+100	0	0.1	2.58	1.68	2.58	1.68	
+100	0	0.5	1.94	1.64	1.94	1.63	
+100	0	1	1.35	1.46	1.35	1.46	
+100	0	2	0.65	1.05	0.66	1.05	
+100	0	4	0.15	0.47	0.15	0.48	
+100	2	0	8.33	2.89	8.33	2.88	
+100	2	0.1	7.95	2.99	7.96	2.98	
+100	2	0.5	6.63	3.12	6.71	3.1	
+100	2	1	5.37	3.01	5.49	3.02	
+100	2	2	3.59	2.6	3.72	2.64	
+100	2	4	1.55	1.76	1.64	1.82	
+100	4	0	13.89	3.73	13.89	3.72	
+100	4	0.1	13.5	3.81	13.53	3.78	
+100	4	0.5	12.17	3.92	12.32	3.9	
+100	4	1	10.83	3.9	11.06	3.9	
+100	4	2	8.62	3.77	8.97	3.81	
+100	4	4	5.17	3.33	5.57	3.47	
+150	0	0	4.17	2.04	4.17	2.03	
+150	0	0.1	3.88	2.1	3.87	2.1	
+150	0	0.5	2.9	2.14	2.91	2.14	
+150	0	1	2.02	1.95	2.03	1.95	
+150	0	2	0.97	1.41	0.98	1.4	
+150	0	4	0.22	0.62	0.22	0.62	
+150	2	0	12.5	3.53	12.5	3.55	
+150	2	0.1	11.92	3.76	11.94	3.73	
+150	2	0.5	9.95	4.11	10.08	4.1	
+150	2	1	8.06	4.04	8.22	4.05	
+150	2	2	5.39	3.54	5.57	3.58	
+150	2	4	2.33	2.41	2.42	2.46	
+150	4	0	20.83	4.56	20.85	4.58	
+150	4	0.1	20.25	4.74	20.3	4.68	
+150	4	0.5	18.26	5.05	18.51	5.04	
+150	4	1	16.24	5.11	16.58	5.11	
+150	4	2	12.94	5.06	13.44	5.07	
+150	4	4	7.76	4.6	8.27	4.72	
+200	0	0	5.56	2.36	5.56	2.36	
+200	0	0.1	5.17	2.48	5.17	2.47	
+200	0	0.5	3.87	2.61	3.88	2.62	
+200	0	1	2.69	2.42	2.7	2.42	
+200	0	2	1.3	1.76	1.3	1.75	
+200	0	4	0.3	0.77	0.3	0.76	
+200	2	0	16.67	4.08	16.67	4.07	
+200	2	0.1	15.89	4.45	15.94	4.43	
+200	2	0.5	13.27	5.06	13.41	5.05	
+200	2	1	10.75	5.05	10.97	5.05	
+200	2	2	7.18	4.46	7.41	4.5	
+200	2	4	3.11	3.05	3.26	3.13	
+200	4	0	27.78	5.27	27.77	5.25	
+200	4	0.1	27	5.56	27.1	5.53	
+200	4	0.5	24.35	6.1	24.64	6.06	
+200	4	1	21.65	6.26	22.13	6.23	
+200	4	2	17.25	6.3	17.91	6.31	
+200	4	4	10.35	5.84	11.08	6.01	
+300	4	0	41.63	6.4	41.63	6.4	
+300	4	1	26.21	7.5	26.21	7.5	
+300	4	2	20.56	6.88	20.56	6.88	
+300	4	4	7.96	6.25	7.96	6.25	
+1000	0	0	26.76	5.03	26.76	5.03		
+1000	0	1	21.08	3.12	21.08	3.12		
+1000	0	2	18.62	1.74	18.62	1.74		
+1000	1	0	27.73	5.27	27.73	5.27		
+1000	1	1	26.37	5.14	26.37	5.14		
+1000	1	2	23.28	4.82	23.28	4.82		
+1000	2	0	27.79	5.34	27.79	5.34		
+1000	2	1	26.37	5.14	26.37	5.14		
+1000	2	2	23.28	4.82	23.28	4.82