rename the plot_test_mass_shifts.py

fgcz · Nov 7, 2024 · 6d85e28 · 6d85e28
1 parent 82289de
commit 6d85e28
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Showing 3 changed files with 1 addition and 3 deletions.
diff --git a/src/depiction_targeted_preproc/pipeline_config/artifacts_mapping.py b/src/depiction_targeted_preproc/pipeline_config/artifacts_mapping.py
@@ -21,8 +21,6 @@
     # TODO
     PipelineArtifact.CALIB_HEATMAP: [
         "qc/plot_calibration_map.pdf",
-        # ->renamed into plot_test_mass_shifts.pdf
-        # "qc/plot_calibration_map_v2.pdf",
     ],
     PipelineArtifact.DEBUG: [
         "qc/plot_marker_presence_cv.pdf",

diff --git a/...oc/workflow/qc/plot_calibration_map_v2.py → ...proc/workflow/qc/plot_test_mass_shifts.py b/...oc/workflow/qc/plot_calibration_map_v2.py → ...proc/workflow/qc/plot_test_mass_shifts.py
diff --git a/src/depiction_targeted_preproc/workflow/rules/rules_qc.smk b/src/depiction_targeted_preproc/workflow/rules/rules_qc.smk
@@ -106,7 +106,7 @@ rule qc_plot_test_mass_shifts:
     output:
         pdf="{sample}/qc/plot_test_mass_shifts.pdf",
     shell:
-        "python -m depiction_targeted_preproc.workflow.qc.plot_calibration_map_v2"
+        "python -m depiction_targeted_preproc.workflow.qc.plot_test_mass_shifts"
         " --input-mass-shifts {input.mass_shifts}"
         " --output-pdf {output.pdf}"