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create the folder
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leoschwarz committed Nov 13, 2024
1 parent 6d65cb5 commit 8e2146a
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1 change: 1 addition & 0 deletions system_tests/calibration/test_pipeline_calibration_only.py
Original file line number Diff line number Diff line change
Expand Up @@ -17,6 +17,7 @@ def copy_input_files(target_dir: Path):
source_dir = Path(__file__).parents[1] / "inputs"
shutil.copy(source_dir / "tonsil.imzML", target_dir / "raw.imzML")
shutil.copy(source_dir / "tonsil.ibd", target_dir / "raw.ibd")
(target_dir / "panels").mkdir(parents=True, exist_ok=True)
shutil.copy(source_dir / "panel.csv", target_dir / "panels" / "unstandardized_full.csv")


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