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Miniconda Environments
Adam Kimbler edited this page Aug 7, 2017
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- Open a terminal locally on your computer
- SSH onto the HPC by typing:
ssh [email protected]
orssh [email protected]
- Open a terminal on the HPC
- Type the following commands on the terminal command line:
module add miniconda/2.7/4.2.12
conda create -p /home/data/madlab/envs/NAMEOFENVIRONMENT name_of_package_1 name_of_package_2
source activate /home/data/madlab/envs/NAMEOFENVIRONMENT
For more information, visit the conda environment documentation here
- Moving DICOMs to HPC
- DICOM Conversion
- Freesurfer Recon_All, Quality Assurance, and Resubmission
- Preprocessing
- Normalization To Be Completed
- Creation of EV Files
- First Level Analysis
- Second Level Analysis To Be Completed
- Group Level Analysis To Be Completed
- DWI To Be Completed