This repository has been archived by the owner on Jan 10, 2019. It is now read-only.

Version 0.3.0

agitter released this 03 Sep 20:39

· 41 commits to master since this release

99309ee

Bug fixes:

Remove conflicts between Forest edge noise and garnetBeta parameters
Correctly query for whether prize nodes are in a directed network
Use correct p-value or q-value to filter Garnet output
Switch to msgsteiner-1.3 to fix bugs with directed edges and suboptimal forests

New features:

BSD license
Forest unit tests to assess the effects of w, beta, mu, and D
Continuous integration testing with Travis CI
Option to save plots from Garnet motif regression
Write Forest objective function value of optimal forest to info file

Assets 2