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Minor fix
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francois-a committed Jun 10, 2016
1 parent 9cdf7a6 commit 01ea5ad
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion python/sort_index_pairs.py
Original file line number Diff line number Diff line change
Expand Up @@ -23,5 +23,5 @@
cmd += ' | sort -n -k1,1 -k2,2 | bgzip -c > '+file_name

subprocess.check_call(cmd, shell=True, executable='/bin/bash')
subprocess.call('tabix -f -b 2 -e 2 '+file_name, shell=True, executable='/bin/bash')
subprocess.check_call('tabix -f -b 2 -e 2 '+file_name, shell=True, executable='/bin/bash')
print('done.')

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