add histamine and defaults for medulla

fruitflybrain · Feb 20, 2021 · b2a5e73 · b2a5e73
1 parent 867a9d0
commit b2a5e73
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diff --git a/neuroarch_nlp/data/defaults.py b/neuroarch_nlp/data/defaults.py
@@ -271,7 +271,9 @@
     #'dan':           'dopamine',
     #'dans':           'dopamine',
     'oa':            'octopamine',
-    'oan':           'octopamine'
+    'oan':           'octopamine',
+    'histamine':     'histamine',
+    'histaminergic': 'histamine',
 }
 
 localities = {

diff --git a/neuroarch_nlp/medulla/defaults.py b/neuroarch_nlp/medulla/defaults.py
@@ -53,59 +53,59 @@
     'm10': ('Subregion', '', 'MED-M10(L)'),
     'left m10': ('Subregion', '', 'MED-M10(L)'),
     'stratum m10': ('Subregion', '', 'MED-M10(L)'),
-    'home column': ('','Circuit','home'),
-    'column home': ('','Circuit','home'),
-    'home': ('','Circuit','home'),
-    'column a': ('','Circuit','A'),
-    'column b': ('','Circuit','B'),
-    'column c': ('','Circuit','C'),
-    'column d': ('','Circuit','D'),
-    'column e': ('','Circuit','E'),
-    'column f': ('','Circuit','F'),
-    'column g': ('','Circuit','G'),
-    'column h': ('','Circuit','H'),
-    'column i': ('','Circuit','I'),
-    'column j': ('','Circuit','J'),
-    'column k': ('','Circuit','K'),
-    'column l': ('','Circuit','L'),
-    'column m': ('','Circuit','M'),
-    'column n': ('','Circuit','N'),
-    'column o': ('','Circuit','O'),
-    'column p': ('','Circuit','P'),
-    'column q': ('','Circuit','Q'),
-    'column s': ('','Circuit','S'),
-    'column t': ('','Circuit','T'),
-    'column u': ('','Circuit','U'),
-    'column v': ('','Circuit','V'),
-    'column w': ('','Circuit','W'),
-    'column x': ('','Circuit','X'),
-    'column y': ('','Circuit','Y'),
-    'column z': ('','Circuit','Z'),
-    'column 3a': ('','Circuit','3A'),
-    'column 3b': ('','Circuit','3B'),
-    'column 3c': ('','Circuit','3C'),
-    'column 3d': ('','Circuit','3D'),
-    'column 3e': ('','Circuit','3E'),
-    'column 3f': ('','Circuit','3F'),
-    'column 3g': ('','Circuit','3G'),
-    'column 3h': ('','Circuit','3H'),
-    'column 3i': ('','Circuit','3I'),
-    'column 3j': ('','Circuit','3J'),
-    'column 3k': ('','Circuit','3K'),
-    'column 3l': ('','Circuit','3L'),
-    'column 3m': ('','Circuit','3M'),
-    'column 3n': ('','Circuit','3N'),
-    'column 3o': ('','Circuit','3O'),
-    'column 3p': ('','Circuit','3P'),
-    'column 3q': ('','Circuit','3Q'),
-    'column 3s': ('','Circuit','3S'),
-    'column 3t': ('','Circuit','3T'),
-    'column 3u': ('','Circuit','3U'),
-    'column 3v': ('','Circuit','3V'),
-    'column 3w': ('','Circuit','3W'),
-    'column 3x': ('','Circuit','3X'),
-    'column 3y': ('','Circuit','3Y'),
-    'column 3z': ('','Circuit','3Z'),
+    'home column': ('','Circuit','Column home'),
+    'column home': ('','Circuit','Column home'),
+    'home': ('','Circuit','Column home'),
+    'column a': ('','Circuit','Column A'),
+    'column b': ('','Circuit','Column B'),
+    'column c': ('','Circuit','Column C'),
+    'column d': ('','Circuit','Column D'),
+    'column e': ('','Circuit','Column E'),
+    'column f': ('','Circuit','Column F'),
+    'column g': ('','Circuit','Column G'),
+    'column h': ('','Circuit','Column H'),
+    'column i': ('','Circuit','Column I'),
+    'column j': ('','Circuit','Column J'),
+    'column k': ('','Circuit','Column K'),
+    'column l': ('','Circuit','Column L'),
+    'column m': ('','Circuit','Column M'),
+    'column n': ('','Circuit','Column N'),
+    'column o': ('','Circuit','Column O'),
+    'column p': ('','Circuit','Column P'),
+    'column q': ('','Circuit','Column Q'),
+    'column s': ('','Circuit','Column S'),
+    'column t': ('','Circuit','Column T'),
+    'column u': ('','Circuit','Column U'),
+    'column v': ('','Circuit','Column V'),
+    'column w': ('','Circuit','Column W'),
+    'column x': ('','Circuit','Column X'),
+    'column y': ('','Circuit','Column Y'),
+    'column z': ('','Circuit','Column Z'),
+    'column 3a': ('','Circuit','Column 3A'),
+    'column 3b': ('','Circuit','Column 3B'),
+    'column 3c': ('','Circuit','Column 3C'),
+    'column 3d': ('','Circuit','Column 3D'),
+    'column 3e': ('','Circuit','Column 3E'),
+    'column 3f': ('','Circuit','Column 3F'),
+    'column 3g': ('','Circuit','Column 3G'),
+    'column 3h': ('','Circuit','Column 3H'),
+    'column 3i': ('','Circuit','Column 3I'),
+    'column 3j': ('','Circuit','Column 3J'),
+    'column 3k': ('','Circuit','Column 3K'),
+    'column 3l': ('','Circuit','Column 3L'),
+    'column 3m': ('','Circuit','Column 3M'),
+    'column 3n': ('','Circuit','Column 3N'),
+    'column 3o': ('','Circuit','Column 3O'),
+    'column 3p': ('','Circuit','Column 3P'),
+    'column 3q': ('','Circuit','Column 3Q'),
+    'column 3s': ('','Circuit','Column 3S'),
+    'column 3t': ('','Circuit','Column 3T'),
+    'column 3u': ('','Circuit','Column 3U'),
+    'column 3v': ('','Circuit','Column 3V'),
+    'column 3w': ('','Circuit','Column 3W'),
+    'column 3x': ('','Circuit','Column 3X'),
+    'column 3y': ('','Circuit','Column 3Y'),
+    'column 3z': ('','Circuit','Column 3Z'),
 }
 
 neuron_types = {}