Added a check to limit the length of the tmpdir

genomewalker · Apr 30, 2024 · b14e13b · b14e13b
1 parent b78d14d
commit b14e13b
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/bam_filter/utils.py b/bam_filter/utils.py
@@ -49,6 +49,10 @@ def check_tmp_dir_exists(tmpdir):
             log.error(f"Temporary directory {tmpdir} does not exist")
             exit(1)
         tmpdir = tempfile.TemporaryDirectory(dir=os.path.abspath(tmpdir))
+        # Check if tmpdir has more than 107 characters
+        if len(tmpdir.name) > 107:
+            log.error(f"Temporary directory {tmpdir.name} has more than 107 characters")
+            exit(1)
     return tmpdir