Update API endpoints

CHANGELOG.md

@@ -45,7 +45,7 @@ Changelog for the Human Reference Atlas (HRA) User Interfaces
 ### Added in 3.3.0
 
 * Added support for the latest CCF Ontology v1.9.0 which adds Placenta, Spinal Cord, new Landmarks for reference organs, and a host of data updates.
-* Added a SPARQL route to the CCF-API for flexible querying of the Ontology and linked data. See the [/v1/sparql docs](https://ccf-api.hubmapconsortium.org/#/operations/sparql) for more information.
+* Added a SPARQL route to the CCF-API for flexible querying of the Ontology and linked data. See the [/v1/sparql docs](https://apps.humanatlas.io/hra-api/#/operations/sparql) for more information.
 * Clean up and bug fixes
 
 ## 3.2.0 - 2022-04-14

README.md

@@ -26,8 +26,8 @@ This repository is a [monorepo](https://en.wikipedia.org/wiki/Monorepo) (multipl
   * Production: <https://hubmapconsortium.github.io/ccf-ui/organ-info/>
   * Staging: <https://hubmap-ccf-ui.netlify.app/organ-info/>
 * CCF API
-  * Production: <https://ccf-api.hubmapconsortium.org>
-  * Staging: <https://r5i95k35v5.us-east-2.awsapprunner.com>
+  * Production: <https://apps.humanatlas.io/hra-api>
+  * Staging: <https://apps.humanatlas.io/hra-api--staging>
   * OpenAPI Specification: [ccf-api-spec.yaml](ccf-api-spec.yaml)
 * CCF API Client Libraries:
   * JavaScript: ![npm (scoped)](https://img.shields.io/npm/v/@ccf-openapi/js-client)  [@ccf-openapi/js-client](https://www.npmjs.com/package/@ccf-openapi/js-client)

ccf-api-spec.yaml

@@ -1,17 +1,17 @@
 openapi: "3.0.3"
 info:
-  title: CCF-API
+  title: HRA-API
   description: |
     This API provides programmatic access to data registered to the Human Reference Atlas (HRA).
     See the [HuBMAP HRA Portal](https://humanatlas.io/) for details.
   version: 1.0.0
 servers:
-  - description: CCF-API
-    url: /v1
+  - description: HRA-API
+    url: ./v1
   - description: Production Server (backup)
-    url: https://ccf-api.hubmapconsortium.org/v1
+    url: https://apps.humanatlas.io/hra-api/v1
   - description: Staging Server
-    url: https://r5i95k35v5.us-east-2.awsapprunner.com/v1
+    url: https://apps.humanatlas.io/hra-api--staging/v1
 
 x-preprocessor:
   description: |

ccf-api-usage.ipynb

@@ -141,11 +141,11 @@
     "<a id='config'></a>\n",
     "### Configuration\n",
     "ccf-openapi can fetch data from \n",
-    "> CCF-API: https://ccf-api.hubmapconsortium.org/v1 <br> \n",
-    "> Staging Server: https://r5i95k35v5.us-east-2.awsapprunner.com/v1 <br>\n",
+    "> HRA-API: https://apps.humanatlas.io/hra-api/v1 <br> \n",
+    "> Staging Server: https://apps.humanatlas.io/hra-api--staging/v1 <br>\n",
     "> You could also use any other instance that you decide to host our code on\n",
     "\n",
-    "You can get more information about our APIs [here](https://ccf-api.hubmapconsortium.org/#/).\n",
+    "You can get more information about our APIs [here](https://apps.humanatlas.io/hra-api/#/).\n",
     "\n",
     "You'll need to point the host in the configuration to one of the links: "
    ]
@@ -158,7 +158,7 @@
    "outputs": [],
    "source": [
     "configuration = ccf_openapi_client.Configuration(\n",
-    "    host = \"https://ccf-api.hubmapconsortium.org/v1\"\n",
+    "    host = \"https://apps.humanatlas.io/hra-api/v1\"\n",
     ")"
    ]
   },
@@ -509,7 +509,7 @@
     "***\n",
     "<a id='spatial_entity'></a>\n",
     "#### Given a SpatialEntity already placed relative to a reference SpatialEntity retrieve a new direct SpatialPlacement to the given SpatialEntity IRI\n",
-    "More Info : https://ccf-api.hubmapconsortium.org/#/operations/get-spatial-placement\n",
+    "More Info : https://apps.humanatlas.io/hra-api/#/operations/get-spatial-placement\n",
     "<pre>\n",
     "Accepted Parameters:\n",
     "    get_spatial_placement_request = {\n",

ccf-api-usecase.ipynb

@@ -5,7 +5,7 @@
    "id": "a398796e",
    "metadata": {},
    "source": [
-    "### CCF API UseCase Documentation\n",
+    "### HRA API UseCase Documentation\n",
     "\n",
     "[Click here](https://github.com/hubmapconsortium/ccf-ui/blob/main/ccf-api-usage.ipynb) to view the installation and general documentation for ccf-api python module.\n",
     "\n",
@@ -71,7 +71,7 @@
    "source": [
     "\n",
     "configuration = ccf_openapi_client.Configuration(\n",
-    "    host = \"https://r5i95k35v5.us-east-2.awsapprunner.com/v1\"\n",
+    "    host = \"https://apps.humanatlas.io/hra-api--staging/v1\"\n",
     ")\n",
     "api_client = ccf_openapi_client.ApiClient(configuration)\n",
     "\n",

projects/ccf-body-ui-wc/src/environments/environment.prod.ts

@@ -9,7 +9,7 @@ export const environment = {
     'https://portal.test.hubmapconsortium.org'
   ],
   dbOptions: {
-    ccfOwlUrl: 'https://ccf-api.hubmapconsortium.org/v1/ccf.owl.n3store.json',
+    ccfOwlUrl: 'https://apps.humanatlas.io/hra-api/v1/ccf.owl.n3store.json',
     ccfContextUrl: 'https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld',
     dataSources: [
       'https://cdn.jsdelivr.net/gh/hubmapconsortium/ccf-ui@1/assets/kpmp/data/rui_locations.jsonld',

projects/ccf-body-ui-wc/src/environments/environment.staging.ts

@@ -9,7 +9,7 @@ export const environment = {
     'https://portal.test.hubmapconsortium.org'
   ],
   dbOptions: {
-    ccfOwlUrl: 'https://ccf-api.hubmapconsortium.org/v1/ccf.owl.n3store.json',
+    ccfOwlUrl: 'https://apps.humanatlas.io/hra-api/v1/ccf.owl.n3store.json',
     ccfContextUrl: 'https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld',
     dataSources: [
       'https://cdn.jsdelivr.net/gh/hubmapconsortium/ccf-ui@1/assets/kpmp/data/rui_locations.jsonld',

projects/ccf-body-ui-wc/src/environments/environment.ts

@@ -11,7 +11,7 @@ export const environment = {
     'https://portal.test.hubmapconsortium.org'
   ],
   dbOptions: {
-    ccfOwlUrl: 'https://ccf-api.hubmapconsortium.org/v1/ccf.owl.n3store.json',
+    ccfOwlUrl: 'https://apps.humanatlas.io/hra-api/v1/ccf.owl.n3store.json',
     ccfContextUrl: 'https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld',
     dataSources: [
       'https://cdn.jsdelivr.net/gh/hubmapconsortium/ccf-ui@1/assets/kpmp/data/rui_locations.jsonld',

projects/ccf-eui/src/environments/environment.prod.ts

@@ -7,7 +7,7 @@ export const environment = {
     'https://portal.test.hubmapconsortium.org'
   ],
   dbOptions: {
-    ccfOwlUrl: 'https://ccf-api.hubmapconsortium.org/v1/ccf.owl.n3store.json',
+    ccfOwlUrl: 'https://apps.humanatlas.io/hra-api/v1/ccf.owl.n3store.json',
     ccfContextUrl: 'https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld',
     dataSources: [
       'assets/kpmp/data/rui_locations.jsonld',
@@ -23,7 +23,7 @@ export const environment = {
     hubmapToken: localStorage.getItem('HUBMAP_TOKEN') ?? '',
 
     useRemoteApi: false,
-    remoteApiEndpoint: 'https://ccf-api.hubmapconsortium.org/v1'
+    remoteApiEndpoint: 'https://apps.humanatlas.io/hra-api/v1'
   },
   customization: {
     theme: 'hubmap',

projects/ccf-eui/src/environments/environment.staging.ts

@@ -7,7 +7,7 @@ export const environment = {
     'https://portal.test.hubmapconsortium.org'
   ],
   dbOptions: {
-    ccfOwlUrl: 'https://r5i95k35v5.us-east-2.awsapprunner.com/v1/ccf.owl.n3store.json',
+    ccfOwlUrl: 'https://apps.humanatlas.io/hra-api--staging/v1/ccf.owl.n3store.json',
     ccfContextUrl: 'https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld',
     dataSources: [
       'assets/kpmp/data/rui_locations.jsonld',
@@ -23,7 +23,7 @@ export const environment = {
     hubmapToken: localStorage.getItem('HUBMAP_TOKEN') ?? '',
 
     useRemoteApi: false,
-    remoteApiEndpoint: 'https://r5i95k35v5.us-east-2.awsapprunner.com/v1'
+    remoteApiEndpoint: 'https://apps.humanatlas.io/hra-api--staging/v1'
   },
   customization: {
     theme: 'hubmap',

projects/ccf-eui/src/environments/environment.ts

@@ -28,8 +28,8 @@ export const environment = {
     hubmapToken: localStorage.getItem('HUBMAP_TOKEN') ?? '',
 
     useRemoteApi: false,
-    remoteApiEndpoint: 'https://r5i95k35v5.us-east-2.awsapprunner.com/v1'
-    // remoteApiEndpoint: 'https://ccf-api.hubmapconsortium.org/v1'
+    remoteApiEndpoint: 'https://apps.humanatlas.io/hra-api--staging/v1'
+    // remoteApiEndpoint: 'https://apps.humanatlas.io/hra-api/v1'
     // remoteApiEndpoint: 'http://localhost:8080/v1'
   },
   customization: {

projects/ccf-eui/src/webcomponent-example.html

@@ -24,7 +24,7 @@
   <!--
     <ccf-eui
       use-remote-api="true"
-      remote-api-endpoint="https://ccf-api.hubmapconsortium.org/v1"
+      remote-api-endpoint="https://apps.humanatlas.io/hra-api/v1"
       >
     </ccf-eui>
    -->

projects/ccf-organ-info/src/environments/environment.prod.ts

@@ -9,7 +9,7 @@ export const environment = {
     'https://portal.test.hubmapconsortium.org'
   ],
   dbOptions: {
-    ccfOwlUrl: 'https://ccf-api.hubmapconsortium.org/v1/ccf.owl.n3store.json',
+    ccfOwlUrl: 'https://apps.humanatlas.io/hra-api/v1/ccf.owl.n3store.json',
     ccfContextUrl: 'https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld',
     dataSources: [
       'https://cdn.jsdelivr.net/gh/hubmapconsortium/ccf-ui@gh-pages/assets/kpmp/data/rui_locations.jsonld',
@@ -22,7 +22,7 @@ export const environment = {
     hubmapToken: localStorage.getItem('HUBMAP_TOKEN') ?? '',
 
     useRemoteApi: false,
-    remoteApiEndpoint: 'https://ccf-api.hubmapconsortium.org/v1'
+    remoteApiEndpoint: 'https://apps.humanatlas.io/hra-api/v1'
   },
   googleAnalyticsToken: window.location.hostname === 'portal.hubmapconsortium.org' ? 'G-1WRJHN9FM6' : 'G-J9HWV9QPJ4'
 };

projects/ccf-organ-info/src/environments/environment.staging.ts

@@ -9,7 +9,7 @@ export const environment = {
     'https://portal.test.hubmapconsortium.org'
   ],
   dbOptions: {
-    ccfOwlUrl: 'https://r5i95k35v5.us-east-2.awsapprunner.com/v1/ccf.owl.n3store.json',
+    ccfOwlUrl: 'https://apps.humanatlas.io/hra-api--staging/v1/ccf.owl.n3store.json',
     ccfContextUrl: 'https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld',
     dataSources: [
       'https://cdn.jsdelivr.net/gh/hubmapconsortium/ccf-ui@staging/assets/kpmp/data/rui_locations.jsonld',
@@ -22,7 +22,7 @@ export const environment = {
     hubmapToken: localStorage.getItem('HUBMAP_TOKEN') ?? '',
 
     useRemoteApi: false,
-    remoteApiEndpoint: 'https://r5i95k35v5.us-east-2.awsapprunner.com/v1'
+    remoteApiEndpoint: 'https://apps.humanatlas.io/hra-api--staging/v1'
   },
   googleAnalyticsToken: 'G-ERNVZ1Q4KE'
 };

projects/ccf-organ-info/src/environments/environment.ts

@@ -11,7 +11,7 @@ export const environment = {
     'https://portal.test.hubmapconsortium.org'
   ],
   dbOptions: {
-    ccfOwlUrl: 'https://ccf-api.hubmapconsortium.org/v1/ccf.owl.n3store.json',
+    ccfOwlUrl: 'https://apps.humanatlas.io/hra-api/v1/ccf.owl.n3store.json',
     ccfContextUrl: 'https://hubmapconsortium.github.io/ccf-ontology/ccf-context.jsonld',
     dataSources: [
       'https://cdn.jsdelivr.net/gh/hubmapconsortium/ccf-ui@gh-pages/assets/kpmp/data/rui_locations.jsonld',
@@ -24,7 +24,7 @@ export const environment = {
     hubmapToken: localStorage.getItem('HUBMAP_TOKEN') ?? '',
 
     useRemoteApi: false,
-    remoteApiEndpoint: 'https://ccf-api.hubmapconsortium.org/v1'
+    remoteApiEndpoint: 'https://apps.humanatlas.io/hra-api/v1'
   },
   googleAnalyticsToken: 'G-B3DT7XPMRT'
 };