Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

update strata var to group_var #1246

Open
wants to merge 5 commits into
base: main
Choose a base branch
from
Open

Conversation

ayogasekaram
Copy link
Contributor

to match control_lineplot_vars() in tern

closes #1245

Copy link
Contributor

github-actions bot commented Nov 14, 2024

Unit Tests Summary

    1 files     70 suites   1h 8m 36s ⏱️
  724 tests   583 ✅ 110 💤 31 ❌
1 994 runs  1 724 ✅ 225 💤 45 ❌

For more details on these failures, see this check.

Results for commit ae7e067.

♻️ This comment has been updated with latest results.

Copy link
Contributor

@edelarua edelarua left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Looks good! Can you keep the strata argument in tm_g_lineplot() and start a deprecation cycle for it in case people are unaware of the name change?

Thanks!

Copy link
Contributor

github-actions bot commented Nov 14, 2024

Unit Test Performance Difference

Test suite performance difference
Test Suite $Status$ Time on main $±Time$ $±Tests$ $±Skipped$ $±Failures$ $±Errors$
shinytest2-tm_a_mmrm 💚 $736.91$ $-4.07$ $0$ $0$ $0$ $0$
shinytest2-tm_g_barchart_simple 💚 $236.45$ $-5.77$ $0$ $0$ $0$ $0$
shinytest2-tm_g_forest_rsp 💚 $145.66$ $-3.31$ $0$ $0$ $0$ $0$
shinytest2-tm_g_forest_tte 💚 $55.85$ $-1.33$ $0$ $0$ $0$ $0$
shinytest2-tm_g_ipp 💚 $112.04$ $-2.98$ $0$ $0$ $0$ $0$
shinytest2-tm_g_km 💚 $275.43$ $-7.72$ $0$ $0$ $0$ $0$
shinytest2-tm_g_lineplot 💚 $89.98$ $-2.95$ $+10$ $0$ $+5$ $0$
shinytest2-tm_g_pp_adverse_events 💚 $126.57$ $-3.96$ $0$ $0$ $0$ $0$
shinytest2-tm_g_pp_patient_timeline 💚 $252.38$ $-7.04$ $0$ $0$ $0$ $0$
shinytest2-tm_g_pp_therapy 💚 $173.14$ $-3.57$ $0$ $0$ $0$ $0$
shinytest2-tm_g_pp_vitals 💚 $89.49$ $-2.45$ $0$ $0$ $0$ $0$
shinytest2-tm_t_abnormality 💚 $69.46$ $-1.25$ $0$ $0$ $0$ $0$
shinytest2-tm_t_abnormality_by_worst_grade 💚 $70.49$ $-2.65$ $0$ $0$ $0$ $0$
shinytest2-tm_t_ancova 💚 $100.51$ $-4.04$ $0$ $0$ $0$ $0$
shinytest2-tm_t_binary_outcome 💚 $78.87$ $-2.05$ $0$ $0$ $0$ $0$
shinytest2-tm_t_coxreg 💚 $75.21$ $-1.41$ $0$ $0$ $0$ $0$
shinytest2-tm_t_events 💚 $62.61$ $-1.72$ $0$ $0$ $0$ $0$
shinytest2-tm_t_events_by_grade 💚 $92.46$ $-3.49$ $0$ $0$ $0$ $0$
shinytest2-tm_t_events_patyear 💚 $52.92$ $-2.40$ $0$ $0$ $0$ $0$
shinytest2-tm_t_events_summary 💚 $69.34$ $-2.53$ $0$ $0$ $0$ $0$
shinytest2-tm_t_exposure 💚 $80.14$ $-3.62$ $0$ $0$ $0$ $0$
shinytest2-tm_t_logistic 💚 $62.57$ $-2.87$ $0$ $0$ $0$ $0$
shinytest2-tm_t_mult_events 💚 $60.32$ $-3.60$ $0$ $0$ $0$ $0$
shinytest2-tm_t_pp_basic_info 💚 $42.71$ $-2.01$ $0$ $0$ $0$ $0$
shinytest2-tm_t_pp_laboratory 💚 $131.99$ $-2.97$ $0$ $0$ $0$ $0$
shinytest2-tm_t_pp_medical_history 💚 $67.78$ $-2.27$ $0$ $0$ $0$ $0$
shinytest2-tm_t_pp_prior_medication 💚 $78.45$ $-2.75$ $0$ $0$ $0$ $0$
shinytest2-tm_t_shift_by_arm 💚 $60.09$ $-1.97$ $0$ $0$ $0$ $0$
shinytest2-tm_t_shift_by_arm_by_worst 💚 $92.24$ $-3.93$ $0$ $0$ $0$ $0$
shinytest2-tm_t_shift_by_grade 💚 $82.40$ $-2.54$ $0$ $0$ $0$ $0$
shinytest2-tm_t_smq 💚 $61.15$ $-2.66$ $0$ $0$ $0$ $0$
shinytest2-tm_t_summary 💚 $40.69$ $-1.22$ $0$ $0$ $0$ $0$
shinytest2-tm_t_summary_by 💚 $82.44$ $-1.22$ $0$ $0$ $0$ $0$
shinytest2-tm_t_tte 💚 $68.81$ $-1.31$ $0$ $0$ $0$ $0$

Results for commit c971325

♻️ This comment has been updated with latest results.

Copy link
Contributor

@edelarua edelarua left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Hi @ayogasekaram,

A few suggestions from me, plus a fix for the missing argument error! :)

R/tm_g_lineplot.R Outdated Show resolved Hide resolved
R/tm_g_lineplot.R Outdated Show resolved Hide resolved
R/tm_g_lineplot.R Show resolved Hide resolved
ayogasekaram and others added 2 commits November 18, 2024 10:44
Co-authored-by: Emily de la Rua <[email protected]>
Signed-off-by: Abinaya Yogasekaram <[email protected]>
R/tm_g_lineplot.R Outdated Show resolved Hide resolved
Co-authored-by: Emily de la Rua <[email protected]>
Signed-off-by: Abinaya Yogasekaram <[email protected]>
Copy link
Contributor

@edelarua edelarua left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Good to go now - thanks Abi!!

@ayogasekaram ayogasekaram enabled auto-merge (squash) November 18, 2024 16:50
@ayogasekaram
Copy link
Contributor Author

Hey @shajoezhu
FYI: I think I'm running into the same test failures as Emily mentioned in the other PR.

@shajoezhu
Copy link
Contributor

blocked by #1248

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
Projects
None yet
Development

Successfully merging this pull request may close these issues.

[Bug]: tm_g_lineplot: unused argument (strata = "ARM")
3 participants