Merge pull request #40 from shenshan/master

Small bug fix, lock datajoint version number 0.12, add wheel to cron job

apt_requirements.txt

@@ -1 +1,14 @@
 libgl1-mesa-glx
+libegl1-mesa
+libxrandr2
+libxrandr2
+libxss1
+libxcursor1
+libxcomposite1
+libasound2
+libxi6
+libxtst6
+libxi-dev
+libxmu-dev
+libglu1-mesa-dev
+xvfb

ibl_pipeline/histology.py

@@ -5,6 +5,7 @@
 from tqdm import tqdm
 from ibllib.pipes.ephys_alignment import EphysAlignment
 import warnings
+from os import environ
 
 try:
     from oneibl.one import ONE

scripts/ingest_increment.py

@@ -1,5 +1,8 @@
 from ibl_pipeline.process import autoprocess, get_timezone, process_histology, process_qc
+from ibl_pipeline.group_shared import wheel
 
 autoprocess.process_new(timezone=get_timezone())
 process_histology.main()
 process_qc.main()
+wheel.WheelMoveSet.populate(display_progress=True, suppress_errors=True)
+wheel.MovementTimes.populate(display_progress=True, suppress_errors=True)

setup.py

@@ -5,12 +5,12 @@
 here = path.abspath(path.dirname(__file__))
 
 setup(
-    name='ibl_pipeline',
-    version='0.2.3',
+    name='ibl-pipeline',
+    version='0.2.4',
     description='Datajoint schemas for IBL',
     author='Vathes',
     author_email='[email protected]',
     packages=find_packages(exclude=[]),
-    install_requires=['datajoint>=0.12', 'ibllib>=1.4.11', 'numpy>=1.18.1', 'seaborn>=0.10.0', 'globus_sdk', 'boto3', 'colorlover', 'scikits.bootstrap', 'statsmodels>=0.10.1', 'plotly>=4.1.0'],
+    install_requires=['datajoint~=0.12', 'ibllib>=1.4.11', 'numpy>=1.18.1', 'seaborn>=0.10.0', 'globus_sdk', 'boto3', 'colorlover', 'scikits.bootstrap', 'statsmodels>=0.10.1', 'plotly>=4.1.0'],
     scripts=['scripts/ibl-shell.py'],
 )