Removed testing artifact

iquasere · Nov 30, 2022 · 3c8e180 · 3c8e180
1 parent 047195a
commit 3c8e180
Showing 1 changed file with 0 additions and 2 deletions.
diff --git a/upimapi.py b/upimapi.py
@@ -1188,15 +1188,13 @@ def upimapi():
                 make_diamond_database(database, f"{'.'.join(database.split('.')[:-1])}.dmnd")
             database = f"{'.'.join(database.split('.')[:-1])}.dmnd"
         (b, c) = block_size_and_index_chunks(argsb=args.block_size, argsc=args.index_chunks)
-        '''
         run_diamond(
             args.input, f'{args.output}/aligned.blast', f'{args.output}/unaligned.blast', database,
             threads=args.threads, max_target_seqs=args.max_target_seqs, b=b, c=c, e_value=args.evalue,
             bit_score=args.bitscore, pident=args.pident)
         if args.max_target_seqs > 1:
             blast_consensus(f'{args.output}/aligned.blast').to_csv(
                 f'{args.output}/consensus.blast', sep='\t', index=False)
-        '''
         args.input = f'{args.output}/aligned.blast'
         args.blast = True