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  1. CSI_wes_pipeline CSI_wes_pipeline Public

    Whole exome processing workflow for CSI data generated by HGSC

    Python 1

  2. idep idep Public

    Forked from iDEP-SDSU/idep

    Integrated Differential Expression and Pathway analysis

    R

  3. NIAID NIAID Public

    Forked from CCBR/NIAID

    Python

  4. Pipeliner Pipeliner Public

    Forked from DLWheeler/Pipeliner

    Pipeliner Program

    Ragel

  5. NCBR_wgs_pipeline NCBR_wgs_pipeline Public

    Shell 3

  6. somatic_analysis_pipeline somatic_analysis_pipeline Public

    workflow for somatic mutation calling, CNV calling, HLA typing, HLA mutation calling, and subclone analysis

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March 2025

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