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update conda env
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@jodyphelan
jodyphelan committed Jun 24, 2024
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27 changes: 14 additions & 13 deletions conda/linux-latest.txt
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# $ conda create --name <env> --file <this file>
# platform: linux-64
@EXPLICIT
https://conda.anaconda.org/bioconda/linux-64/seqkit-2.8.0-h9ee0642_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.2.2-hbcca054_0.conda
https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2024.6.2-hbcca054_0.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-dejavu-sans-mono-2.37-hab24e00_0.tar.bz2
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/font-ttf-source-code-pro-2.038-h77eed37_0.tar.bz2
Expand All @@ -13,6 +12,7 @@ https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.40-h41732ed_0
https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-13.2.0-h7e041cc_4.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/mpi-1.0-openmpi.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/python_abi-3.10-4_cp310.conda
https://conda.anaconda.org/bioconda/linux-64/seqkit-2.8.2-h9ee0642_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/tzdata-2023d-h0c530f3_0.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/fonts-conda-forge-1-0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/libgomp-13.2.0-h807b86a_4.conda
Expand Down Expand Up @@ -49,7 +49,7 @@ https://conda.anaconda.org/conda-forge/linux-64/libxcrypt-4.4.36-hd590300_1.cond
https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.13-hd590300_5.conda
https://conda.anaconda.org/conda-forge/linux-64/ncurses-6.4-h59595ed_2.conda
https://conda.anaconda.org/conda-forge/linux-64/oniguruma-6.9.9-hd590300_0.conda
https://conda.anaconda.org/conda-forge/linux-64/openssl-3.2.1-hd590300_0.conda
https://conda.anaconda.org/conda-forge/linux-64/openssl-3.3.1-h4ab18f5_0.conda
https://conda.anaconda.org/conda-forge/linux-64/pixman-0.43.2-h59595ed_0.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/pthread-stubs-0.4-h36c2ea0_1001.tar.bz2
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/wfa2-lib-2.3.4-h4ac6f70_0.tar.bz2
Expand Down Expand Up @@ -115,7 +115,7 @@ https://conda.anaconda.org/conda-forge/noarch/bitstring-3.1.9-pyhd8ed1ab_0.tar.b
https://conda.anaconda.org/conda-forge/linux-64/brotli-1.1.0-hd590300_1.conda
https://conda.anaconda.org/conda-forge/linux-64/brotli-python-1.1.0-py310hc6cd4ac_1.conda
https://conda.anaconda.org/conda-forge/noarch/cachetools-4.2.4-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/certifi-2024.2.2-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/certifi-2024.6.2-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/charset-normalizer-3.3.2-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/cycler-0.12.1-pyhd8ed1ab_0.conda
Expand All @@ -138,10 +138,8 @@ https://conda.anaconda.org/conda-forge/linux-64/openjpeg-2.5.0-h488ebb8_3.conda
https://conda.anaconda.org/conda-forge/noarch/packaging-23.2-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/pycparser-2.21-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/pygments-2.17.2-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/pyparsing-3.1.2-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/pyparsing-3.1.1-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/pysocks-1.7.1-pyha2e5f31_6.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/python-tzdata-2023.4-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/pytz-2023.4-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/setuptools-69.0.3-pyhd8ed1ab_0.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/six-1.16.0-pyh6c4a22f_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/tomli-2.0.1-pyhd8ed1ab_0.tar.bz2
Expand All @@ -154,8 +152,9 @@ https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-libxt-1.3.0-hd590300_1.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/cairo-1.18.0-h3faef2a_0.conda
https://conda.anaconda.org/conda-forge/linux-64/cffi-1.16.0-py310h2fee648_0.conda
https://conda.anaconda.org/conda-forge/linux-64/curl-8.5.0-hca28451_0.conda
https://conda.anaconda.org/conda-forge/noarch/deprecation-2.1.0-pyh9f0ad1d_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/fonttools-4.49.0-py310h2372a71_0.conda
https://conda.anaconda.org/conda-forge/linux-64/fonttools-4.47.2-py310h2372a71_0.conda
https://conda.anaconda.org/bioconda/linux-64/htslib-1.19.1-h81da01d_0.tar.bz2
https://conda.anaconda.org/bioconda/noarch/itol-config-0.1.0-pyhdfd78af_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/jinja2-3.1.3-pyhd8ed1ab_0.conda
Expand All @@ -172,11 +171,12 @@ https://conda.anaconda.org/conda-forge/noarch/python-docx-1.1.0-pyhd8ed1ab_0.con
https://conda.anaconda.org/conda-forge/noarch/screed-1.1.3-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/tqdm-4.66.1-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/typing-extensions-4.9.0-hd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/urllib3-2.1.0-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/urllib3-2.2.0-pyhd8ed1ab_0.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/xorg-libxi-1.7.10-h7f98852_0.tar.bz2
https://conda.anaconda.org/conda-forge/noarch/annotated-types-0.6.0-pyhd8ed1ab_0.conda
https://conda.anaconda.org/bioconda/linux-64/delly-1.2.6-hb7e2ac5_0.tar.bz2
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/noarch/docxtpl-0.11.5-pyhd8ed1ab_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/git-2.43.0-pl5321h7bc287a_0.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/gsl-2.7-he838d99_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/harfbuzz-8.3.0-h3d44ed6_0.conda
https://conda.anaconda.org/conda-forge/linux-64/numpy-1.26.3-py310hb13e2d6_0.conda
Expand All @@ -191,17 +191,18 @@ https://conda.anaconda.org/conda-forge/linux-64/contourpy-1.2.0-py310hd41b1e2_0.
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/lofreq-2.1.5-py310h47ef89e_10.tar.bz2
https://conda.anaconda.org/bioconda/linux-64/mash-2.3-ha9a2dd8_3.tar.bz2
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/conda-forge/linux-64/openjdk-17.0.8-hbf40d96_2.conda
https://conda.anaconda.org/conda-forge/linux-64/pandas-2.2.0-py310hcc13569_0.conda
https://conda.anaconda.org/conda-forge/noarch/pydantic-2.6.0-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/noarch/rich-argparse-1.4.0-pyhd8ed1ab_0.conda
https://conda.anaconda.org/conda-forge/linux-64/scipy-1.12.0-py310hb13e2d6_2.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/linux-64/tabixpp-1.1.2-hd68fcf3_1.tar.bz2
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/gatk4-4.4.0.0-py36hdfd78af_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/matplotlib-base-3.8.3-py310h62c0568_0.conda
https://conda.anaconda.org/conda-forge/linux-64/matplotlib-base-3.8.2-py310h62c0568_0.conda
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/pilon-1.24-hdfd78af_0.tar.bz2
https://conda.anaconda.org/bioconda/noarch/snpeff-5.2-hdfd78af_0.tar.bz2
https://conda.anaconda.org/t/no-15126f85-4dce-4462-b48d-9bc580ca6641/bioconda/noarch/trimmomatic-0.39-hdfd78af_2.tar.bz2
https://conda.anaconda.org/bioconda/linux-64/vcflib-1.0.9-h146fbdb_4.tar.bz2
https://conda.anaconda.org/bioconda/linux-64/freebayes-1.3.6-hb0f3ef8_7.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/sourmash-minimal-4.8.6-py310h373cc83_0.conda
https://conda.anaconda.org/bioconda/noarch/sourmash-4.8.6-hdfd78af_0.tar.bz2
https://conda.anaconda.org/conda-forge/linux-64/sourmash-minimal-4.8.5-py310h373cc83_0.conda
https://conda.anaconda.org/bioconda/noarch/sourmash-4.8.5-hdfd78af_0.tar.bz2
https://conda.anaconda.org/bioconda/noarch/pathogen-profiler-4.2.0-pyh7cba7a3_0.tar.bz2
https://conda.anaconda.org/bioconda/noarch/tb-profiler-6.2.1-pyhdfd78af_0.tar.bz2

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