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jrihon/README.md

Jrihon

Pharmaceutical Sciences (KU Leuven) with a degree in Drug Design and Development. Did my PhD (Medicinal Chemistry, KU Leuven, Rega Institute) on the topic of synthetic nucleic acids.

Developed software for my PhD and some leisure coding on the side. Actively looking for an opportunity where science meets code.

Programming

Languages

Python | Rust | Bash | Typst | LaTeX | Lua | Julia

Brief encounters with C | Pascal

Check out my projects !

  • jrihon/Ducque - A model builder to generate models of XNA, with user-implementable analogs, in Python!
  • jrihon/puckepy - Python module for QM-based conformational sampling of molecules - written in Rust btw.
  • jrihon/puckers - Rust CLI for QM-based conformational sampling of molecules.
  • jrihon/mutineer.lua - Extensible commenting plugin for nvim, in Lua.
  • jrihon/multi-bibs - Support multiple bibliographies e.g. for thesis manuscripts, in Typst.

.dotfiles (links to configs)

I use the kitty terminal emulator and have my prompts customised through starship. To work and manage projects, I use tmux. All my programming and general text editing is done with neovim.

PhD research

  • Modeling the behaviour of synthetic analogs of DNA and RNA (XNA).
  • Perform predictions using pure in silico methodologies.
  • Use computational chemistry to describe the modified analogs (QM |force field design | MM).
  • Developed cheminformatics tools to design a pipeline for model prediction (programming).

SPOILER ALERT --- GREAT SUCCESS !

Tags

computational chemisty | cheminformatics | molecular dynamics | quantum mechanics | molecular mechanics | python | rust | synthetic nucleic acids | XNA | scientific programming | linear algebra | model builder | cli tools

Online presence

ORCID | LinkedIn | Bibliography - Published Work | CV

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  1. Ducque Ducque Public

    Ducque - Mechanical Nucleic Acid Architect

    Python 1

  2. multi-bibs multi-bibs Public

    Multiple bibliographies, in Typst

    Typst 4

  3. puckepy puckepy Public

    Python module for conformational sampling and puckering formalisms. Written in Rust btw

    Rust