example.ipynb

juglab · Apr 10, 2024 · b14de52 · b14de52
1 parent b2401db
commit b14de52
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Showing 2 changed files with 55 additions and 35 deletions.
diff --git a/denoisplit/notebooks/example.ipynb b/denoisplit/notebooks/example.ipynb
@@ -2,7 +2,7 @@
  "cells": [
   {
    "cell_type": "markdown",
-   "id": "781639b7",
+   "id": "4b02924d",
    "metadata": {
     "cell_marker": "\"\"\"",
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@@ -23,17 +23,40 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "6c41029d",
+   "id": "39252aa8",
    "metadata": {},
    "outputs": [],
    "source": [
     "# a useful library developed by Google for maintaining the ML configs.\n",
     "! pip install ml-collections"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "23efb582",
+   "metadata": {
+    "lines_to_next_cell": 0
+   },
+   "outputs": [],
+   "source": [
+    "! git clone https://github.com/juglab/denoiSplit.git"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "b6e41f1d",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import sys\n",
+    "sys.path.append('./denoiSplit')"
+   ]
+  },
   {
    "cell_type": "markdown",
-   "id": "e476515a",
+   "id": "a0acec45",
    "metadata": {
     "cell_marker": "\"\"\"",
     "lines_to_next_cell": 0
@@ -48,7 +71,7 @@
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@@ -61,7 +84,7 @@
   {
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@@ -78,7 +101,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "dce4c9ad",
+   "id": "84e96ca6",
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    "outputs": [],
    "source": [
@@ -110,7 +133,7 @@
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@@ -131,7 +154,7 @@
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-   "id": "5b29c8ac",
+   "id": "bcca8dc2",
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@@ -161,7 +184,7 @@
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+   "id": "e83242ab",
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     "lines_to_next_cell": 0
@@ -173,7 +196,7 @@
   {
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-   "id": "39660aee",
+   "id": "1ff3cd66",
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@@ -186,7 +209,7 @@
   {
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-   "id": "8ef74b46",
+   "id": "09035708",
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@@ -211,7 +234,7 @@
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+   "id": "a0dc243f",
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@@ -224,7 +247,7 @@
   {
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+   "id": "0cec5ec5",
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@@ -236,7 +259,7 @@
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@@ -248,7 +271,7 @@
   {
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+   "id": "817e538b",
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@@ -271,7 +294,7 @@
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+   "id": "3c06421e",
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     "lines_to_next_cell": 0
@@ -283,7 +306,7 @@
   {
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    "execution_count": null,
-   "id": "bd234250",
+   "id": "eca722a9",
    "metadata": {
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@@ -341,7 +364,7 @@
   },
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-   "id": "2287f57c",
+   "id": "c1c9bd5b",
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@@ -353,7 +376,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "27ed1e7a",
+   "id": "38df4c25",
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@@ -393,7 +416,7 @@
   {
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-   "id": "4518d1f5",
+   "id": "0d0866ed",
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@@ -414,7 +437,7 @@
   },
   {
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-   "id": "9f921be4",
+   "id": "bb4a0b75",
    "metadata": {
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@@ -430,7 +453,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "bb55bc8a",
+   "id": "29754975",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -506,7 +529,7 @@
   },
   {
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-   "id": "2884583e",
+   "id": "d1ce25bb",
    "metadata": {
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@@ -518,7 +541,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "6ab248e8",
+   "id": "3dc1e50d",
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@@ -597,7 +620,7 @@
   },
   {
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+   "id": "d94ea88e",
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@@ -610,7 +633,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "c4575b08",
+   "id": "dc3246db",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -633,15 +656,6 @@
   "jupytext": {
    "cell_metadata_filter": "all",
    "main_language": "python"
-  },
-  "kernelspec": {
-   "display_name": "Python 3",
-   "language": "python",
-   "name": "python3"
-  },
-  "language_info": {
-   "name": "python",
-   "version": "3.10.14"
   }
  },
  "nbformat": 4,

diff --git a/denoisplit/notebooks/example.py b/denoisplit/notebooks/example.py
@@ -15,6 +15,12 @@
 # a useful library developed by Google for maintaining the ML configs.
 ! pip install ml-collections
 
+# %%
+! git clone https://github.com/juglab/denoiSplit.git
+# %%
+import sys
+sys.path.append('./denoiSplit')
+
 # %% [markdown]
 """
 ### Mandatory actions