Update src/loaders/compute_tools/checkm2/checkm2.py

Co-authored-by: MrCreosote <[email protected]>
kbase · Aug 16, 2024 · aeb8762 · aeb8762
1 parent 1e8a74d
commit aeb8762
Showing 1 changed file with 6 additions and 1 deletion.
diff --git a/src/loaders/compute_tools/checkm2/checkm2.py b/src/loaders/compute_tools/checkm2/checkm2.py
@@ -72,7 +72,12 @@ def _run_checkm2(
     metadata = {'tool': 'checkm2',
                 'version': '1.0.1',
                 'command': command,
-                'reference_db': 'diamond_db ver unknown - saved copy in NERSC at global/cfs/cdirs/kbase/collections/libraries/checkm2/1.0.1/uniref100.KO.1.dmnd',
+                 "reference_db": {
+                     "path": "/global/cfs/cdirs/kbase/collections/libraries/checkm2/1.0.1/uniref100.KO.1.dmnd",
+                     "location": "NERSC",
+                     "version": None,
+                     "comment": "diamond_db, ver unknown",
+                 },
                 'ids_to_files': ids_to_files}
     create_tool_metadata(output_dir, metadata)