fix references #29
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| # Workflow derived from https://github.com/r-lib/actions/tree/master/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| branches: [master] | |
| pull_request: | |
| branches: [master] | |
| workflow_dispatch: | |
| branches: [master] | |
| name: run-check | |
| jobs: | |
| run-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
| - {os: ubuntu-latest, r: 'release'} | |
| - {os: ubuntu-20.04, r: '4.2'} | |
| - {os: macOS-latest, r: 'release'} | |
| - {os: windows-latest, r: 'release'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_LIBS_USER: ${{ github.workspace }}/R | |
| steps: | |
| - uses: actions/[email protected] | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - name: Run tests | |
| run: | | |
| sink("test.out") | |
| update.packages(lib.loc=Sys.getenv("R_LIBS_USER")) | |
| if (length(find.package("ggplot2",quiet=TRUE)) < 1) install.packages("ggplot2") | |
| if (length(find.package("dplyr",quiet=TRUE)) < 1) install.packages("dplyr") | |
| if (length(find.package("plyr",quiet=TRUE)) < 1) install.packages("plyr") | |
| if (length(find.package("reshape2",quiet=TRUE)) < 1) install.packages("reshape2") | |
| if (length(find.package("tidyr",quiet=TRUE)) < 1) install.packages("tidyr") | |
| cat("running tutorial codes....") | |
| source("tutorial.R",echo=TRUE) | |
| cat("running munging codes....") | |
| source("munging.R",echo=TRUE) | |
| cat("running viz codes....") | |
| source("viz.R",echo=TRUE) | |
| sink() | |
| shell: Rscript {0} | |
| - uses: actions/[email protected] | |
| with: | |
| name: install-test-${{ matrix.config.os }}-${{ matrix.config.r }} | |
| path: ${{ github.workspace }}/test.out |