python3 compatibility

karim/submit/__init__.py

@@ -1,2 +1,2 @@
-from writeScripts import writeScripts
-from checkFiles import checkFiles
+from karim.submit.writeScripts import writeScripts
+from karim.submit.checkFiles import checkFiles

karim/submit/checkFiles.py

@@ -2,7 +2,7 @@
 import os
 import ROOT
 
-from common import getEntries
+from karim.submit.common import getEntries
 
 def checkFiles(sample, mode, nameRequirement, shellPath, outPath):
     '''

karim/submit/condorSubmit.py

@@ -17,7 +17,7 @@
 log    = {dir}/{name}submitScript.$(Cluster)_$(ProcId).log
 output = {dir}/{name}submitScript.$(Cluster)_$(ProcId).out
 run_as_owner = true
-Requirements = ( OpSysAndVer == "CentOS7" )
+Requirements = ( OpSysAndVer == "RedHat9" )
 RequestMemory = {memory}
 RequestDisk = {disk}
 +RequestRuntime = {runtime}
@@ -133,7 +133,7 @@ def condorSubmit(submitPath):
         process.wait()
         output = process.communicate()
         try:
-            jobID = int(output[0].split(".")[0])
+            jobID = int(output[0].decode().split(".")[0])
         except:
             print("something went wrong with calling the condir_submit command, submission of jobs was not successful")
             print("DEBUG:")
@@ -168,7 +168,7 @@ def monitorJobStatus(jobIDs = None):
         qstat = a.communicate()[0]
 
         nrunning = 0
-        querylines = [line for line in qstat.split("\n") if "Total for query" in line] 
+        querylines = [line for line in qstat.decode().split("\n") if "Total for query" in line] 
 
         # check if query matches
         if len(querylines) == 0:

karim/submit/writeScripts.py

@@ -1,17 +1,15 @@
 import glob
 import os
 import ROOT
-from common import getEntries
+from karim.submit.common import getEntries
 
 scriptTemplate = """
 #!/bin/bash
 export VO_CMS_SW_DIR=/cvmfs/cms.cern.ch
 source $VO_CMS_SW_DIR/cmsset_default.sh
-export SCRAM_ARCH=slc7_amd64_gcc700
 cd {cmssw}/src
 eval `scram runtime -sh`
 cd -
-source {basepath}/venv/bin/activate
 export KERAS_BACKEND=tensorflow
 """
 recoTemplate = """

scripts/generateSubmitScripts.py

@@ -144,7 +144,7 @@
 
 cmd = " ".join([
     "for f in *;",
-    "do python {basedir}/karim/submit/condorSubmit.py",
+    "do python3 {basedir}/karim/submit/condorSubmit.py",
     "-f $f -o ../submit_{name} -M 2000 -r 120 -n {mode}_$f;",
     "done"]).format(
         mode = "karim_"+opts.mode.lower(),