Remove subset_ind argument in rep_diff test

kmayerb · Sep 9, 2020 · 7f5bb65 · 7f5bb65
1 parent f65503e
commit 7f5bb65
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/tcrdist/tests/test_repdiff.py b/tcrdist/tests/test_repdiff.py
@@ -44,7 +44,7 @@ def test_chm_NN(self):
                                   count_col='count',
                                   knn_neighbors=50,
                                   knn_radius=None,
-                                  subset_ind=None,
+                                  #subset_ind=None,
                                   cluster_ind=None)
 
         res = td.stats.neighborhood_diff(self.clone_df, self.pw, x_cols=['Visit', 'Stim'], test_method='chm')
@@ -61,6 +61,7 @@ def test_chi2_NN(self):
     def test_fishers_HC(self):
         res = td.stats.hcluster_diff(self.clone_df, self.pw, x_cols=['Visit'], test_method='fishers')
 
+
     def test_member_summ(self):
         res, Z = td.stats.hcluster_diff(self.clone_df, self.pw, x_cols=['Visit'], test_method='fishers')