Merge pull request #69 from kusumotolab/update_deps

Update ANTLR
kusumotolab · Jan 12, 2025 · 967bb98 · 967bb98
2 parents d43a91e + b0fc889
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diff --git a/.gitignore b/.gitignore
@@ -7,3 +7,8 @@ build
 .idea
 
 .DS_Store
+
+# Execution results
+clone_pairs
+code_blocks
+result_*.csv
diff --git a/README.md b/README.md
@@ -4,47 +4,55 @@ FSE '21 paper implementation ([preprint](./camera-ready.pdf))<br>
 DOI of submitted version executable file of NIL is `10.5281/zenodo.4492665`.
 
 # NIL
+
 NIL is a clone detector using N-gram, Inverted index, and LCS.
 NIL provides scalable large-variance clone detection.
 
 ## Requirements
+
 - JDK 21+
 
 ## Install & Usage
+
 - Clone this repository (`git clone https://github.com/kusumotolab/NIL`)
 - Move into NIL's directory (`cd NIL`) and build NIL (`./gradlew ShadowJar`)
 - Run NIL (`java -jar ./build/libs/NIL-all.jar [options]`)
 - Check the result file
-  - If you didn't specify `-bce` option, the format is `/path/to/file_A,start_line_A,end_line_A,/path/to/file_B,start_line_B,end_line_B`.
-  - If you specified `-bce` option, the format is `dir_A,file_A,start_line_A,end_line_A,dir_B,file_B,start_line_B,end_line_B`
+    - If you didn't specify `-bce` option, the format is
+      `/path/to/file_A,start_line_A,end_line_A,/path/to/file_B,start_line_B,end_line_B`.
+    - If you specified `-bce` option, the format is
+      `dir_A,file_A,start_line_A,end_line_A,dir_B,file_B,start_line_B,end_line_B`
 
 ## Options
-|Name|Description|Default|
-|:--:|:--|:--:|
-|`-s`,`--src`|Input source directory. You must specify the target dir.|None|
-|`-mil`,`--min-line`|Minimum number of lines that a code fragment must be to be treated as a clone.|`6`|
-|`-mit`,`--min-token`|Minimum number of tokens that a code fragment must be to be treated as a clone.|`50`|
-|`-n`,`--n-gram`|N for N-gram.|`5`|
-|`-p`,`--partition-size`|The number of partitions.|`10`|
-|`-f`,`--filtration-threshold`|Threshold used in the filtration phase (%).|`10`|
-|`-v`,`--verification-threshold`|Threshold used in the verificatioin phase (%).|`70`|
-|`-o`,`--output`|Output file name.|`result_{n}_{f}_{v}.csv`|
-|`-t`,`--threads`|The number of threads used for parallel execution (both the *Preprocess* and *Clone detection* phases)|all threads|
-|`-l`,`--language`|[Target language](#Languages)|`java`|
-|`-bce`,`--bigcloneeval`|If you specify `-bce` option, NIL outputs result file feasible to BigCloneEval.|not specified|
-|`-mif`,`--mutationinjectionframework`|If you specify `-mif` option, NIL outputs nothing except for the output file name as standard output.|not specified|
+
+|                 Name                  | Description                                                                                            |         Default          |
+|:-------------------------------------:|:-------------------------------------------------------------------------------------------------------|:------------------------:|
+|             `-s`,`--src`              | Input source directory. You must specify the target dir.                                               |           None           |
+|          `-mil`,`--min-line`          | Minimum number of lines that a code fragment must be to be treated as a clone.                         |           `6`            |
+|         `-mit`,`--min-token`          | Minimum number of tokens that a code fragment must be to be treated as a clone.                        |           `50`           |
+|            `-n`,`--n-gram`            | N for N-gram.                                                                                          |           `5`            |
+|        `-p`,`--partition-size`        | The number of partitions.                                                                              |           `10`           |
+|     `-f`,`--filtration-threshold`     | Threshold used in the filtration phase (%).                                                            |           `10`           |
+|    `-v`,`--verification-threshold`    | Threshold used in the verificatioin phase (%).                                                         |           `70`           |
+|            `-o`,`--output`            | Output file name.                                                                                      | `result_{n}_{f}_{v}.csv` |
+|           `-t`,`--threads`            | The number of threads used for parallel execution (both the *Preprocess* and *Clone detection* phases) |       all threads        |
+|           `-l`,`--language`           | [Target language](#Languages)                                                                          |          `java`          |
+|        `-bce`,`--bigcloneeval`        | If you specify `-bce` option, NIL outputs result file feasible to BigCloneEval.                        |      not specified       |
+| `-mif`,`--mutationinjectionframework` | If you specify `-mif` option, NIL outputs nothing except for the output file name as standard output.  |      not specified       |
 
 ## Languages
-|Name|Option|Extension|
-|:--:|:--:|:--:|
-|Java|`java`|`.java`|
-|C|`c`|`.c`,`.h`|
-|C++|`cpp`|`.cpp`,`.hpp`|
-|C#|`cs`,`csharp`|`.cs`|
-|Python|`py`,`python`|`.py`|
-|Kotlin|`kt`,`kotlin`|`.kt`|
+
+|  Name  |    Option     |   Extension   |
+|:------:|:-------------:|:-------------:|
+|  Java  |    `java`     |    `.java`    |
+|   C    |      `c`      |   `.c`,`.h`   |
+|  C++   |     `cpp`     | `.cpp`,`.hpp` |
+|   C#   | `cs`,`csharp` |     `.cs`     |
+| Python | `py`,`python` |     `.py`     |
+| Kotlin | `kt`,`kotlin` |     `.kt`     |
 
 If you execute NIL on 250-MLOC codebase, we recommend `-p` option to 135.
 
 ## Experiments, datasets, and baseline tools
+
 - Please refer to [EXPERIMENTS.md](./EXPERIMENTS.md)
diff --git a/build.gradle.kts b/build.gradle.kts
@@ -1,12 +1,16 @@
 plugins {
     kotlin("jvm") version "2.0.0"
     id("com.github.johnrengelman.shadow") version "8.1.1"
-    id("antlr")
+
+    antlr
 
     application
 }
 
-java.sourceCompatibility = JavaVersion.VERSION_21
+java {
+    sourceCompatibility = JavaVersion.VERSION_21
+    targetCompatibility = JavaVersion.VERSION_21
+}
 
 repositories {
     mavenCentral()
@@ -29,15 +33,17 @@ dependencies {
     testImplementation("org.jetbrains.kotlin:kotlin-test-junit")
 
     // Use ANTLR
-    antlr("org.antlr:antlr4:4.9")
+    antlr("org.antlr:antlr4:4.13.2")
 }
 
 application {
     mainClass.set("jp.ac.osaka_u.sdl.nil.NILMainKt")
 }
 
 tasks.generateGrammarSource {
+    // Comment out when generating lexers and parsers from g4 file
     enabled = false
+    outputDirectory = file("$projectDir/src/main/java")
 }
 
 tasks.generateTestGrammarSource {

diff --git a/gradle/wrapper/gradle-wrapper.properties b/gradle/wrapper/gradle-wrapper.properties
@@ -1,6 +1,6 @@
 distributionBase=GRADLE_USER_HOME
 distributionPath=wrapper/dists
-distributionUrl=https\://services.gradle.org/distributions/gradle-8.8-bin.zip
+distributionUrl=https\://services.gradle.org/distributions/gradle-8.12-bin.zip
 networkTimeout=10000
 validateDistributionUrl=true
 zipStoreBase=GRADLE_USER_HOME