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No releases available - Exomiser update #25

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pneerincx opened this issue Sep 29, 2020 · 8 comments
Open

No releases available - Exomiser update #25

pneerincx opened this issue Sep 29, 2020 · 8 comments
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documentation Improvements or additions to documentation enhancement New feature or request HPO Exomiser / PhenoGenius
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@pneerincx
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There is a recent commit with commit message "New official release: 2.4", but there are no releases:
https://github.com/lgmgeo/AnnotSV/releases
Could you please hit the "Draft a new release" button to create a properly tagged release?

@lgmgeo
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lgmgeo commented Sep 29, 2020

Hi,
You're right. Thank you for pointing out the omission.
I will tag the next release.
Best,
Véronique

@lgmgeo
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lgmgeo commented Oct 13, 2020

Done

@lgmgeo lgmgeo closed this as completed Oct 13, 2020
@pneerincx
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Thanks!

@Stikus
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Stikus commented Nov 26, 2021

@lgmgeo Hello, recently I've checked for new releases of AnnotSV and understood that there are 3.1 and 3.1.1.
I'm watching for releases in repository, but tags are not releases (only needed part for them). So I don't get any notification from github.

Can you create releases too if you have time?

Btw - I've found 13.0.0 files here: https://exomiser.monarchinitiative.org/exomiser/download - maybe your https://github.com/lgmgeo/AnnotSV/blob/master/share/AnnotSV/jar/exomiser-rest-prioritiser-12.1.0.jar needs update too?

@lgmgeo
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lgmgeo commented Nov 26, 2021

Can you create releases too if you have time?

Of course, release done.

Btw - I've found 13.0.0 files here: https://exomiser.monarchinitiative.org/exomiser/download - maybe your https://github.com/lgmgeo/AnnotSV/blob/master/share/AnnotSV/jar/exomiser-rest-prioritiser-12.1.0.jar needs update too?

Thanks for this report, I will look at it for a next release.

@lgmgeo lgmgeo reopened this Nov 26, 2021
@lgmgeo lgmgeo added documentation Improvements or additions to documentation enhancement New feature or request labels Nov 26, 2021
@Stikus
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Stikus commented Nov 26, 2021

Thanks for fast answer and releases!

@lgmgeo lgmgeo changed the title No releases available No releases available - Exomiser update Dec 7, 2021
@lgmgeo lgmgeo added the HPO Exomiser / PhenoGenius label Feb 16, 2024
@lgmgeo lgmgeo added this to the p milestone Feb 16, 2024
@Stikus
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Stikus commented Aug 28, 2024

@lgmgeo Any news/need for exomiser-rest-prioritiser.jar update?

It is already 14.0.0 version: https://data.monarchinitiative.org/exomiser/latest/exomiser-cli-14.0.0-distribution.zip

Looks like https://github.com/lgmgeo/AnnotSV/blob/master/share/AnnotSV/jar/exomiser-rest-prioritiser-12.1.0.jar is still working, but maybe it needs update.

FYI: Exomiser database file name and size changed: 2202_phenotype.h2.db (9.5 GB) -> 2402_phenotype.mv.db (3GB).

@lgmgeo
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lgmgeo commented Sep 5, 2024

Sorry, nothing planned soon.

Since 2019, with the help of Jules JACOBSEN (Exomiser developer), AnnotSV hacks the exomiser-rest-prioritiser.jar file by simply including the 1902_hg19.tar.gz from the complete distribution.
Actually, it is not possible to update this file by myself.

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