yaml formattiong, change default python version from 3.9 to 3.11 in C…

…I, and add python 3.12 ci

.github/workflows/bump.yml

@@ -11,20 +11,20 @@ jobs:
     runs-on: ubuntu-latest
     if: ${{ contains(github.ref, 'release/') }}
     steps:
-    - uses: actions/checkout@v2
-    - uses: actions/setup-python@v2
-    - name: Install poetry
-      run: pip install poetry
-    - name: Bump version
-      run: git branch --show-current | sed 's|release/||' | xargs poetry version | { printf '::set-output name=PR_TITLE::'; cat; }
-      id: bump
-    - name: Bump version 2
-      run:  git branch --show-current | sed 's|release/||' | xargs -I {} echo '__version__ = "{}"' > pams/version.py
-    - name: Create pull request
-      uses: peter-evans/create-pull-request@v3
-      with:
-        author: GitHub Actions <[email protected]>
-        commit-message: ${{ steps.bump.outputs.PR_TITLE }}
-        delete-branch: true
-        branch-suffix: short-commit-hash
-        title: ${{ steps.bump.outputs.PR_TITLE }}
+      - uses: actions/checkout@v2
+      - uses: actions/setup-python@v2
+      - name: Install poetry
+        run: pip install poetry
+      - name: Bump version
+        run: git branch --show-current | sed 's|release/||' | xargs poetry version | { printf '::set-output name=PR_TITLE::'; cat; }
+        id: bump
+      - name: Bump version 2
+        run: git branch --show-current | sed 's|release/||' | xargs -I {} echo '__version__ = "{}"' > pams/version.py
+      - name: Create pull request
+        uses: peter-evans/create-pull-request@v3
+        with:
+          author: GitHub Actions <[email protected]>
+          commit-message: ${{ steps.bump.outputs.PR_TITLE }}
+          delete-branch: true
+          branch-suffix: short-commit-hash
+          title: ${{ steps.bump.outputs.PR_TITLE }}

.github/workflows/ci-python-min.yml

@@ -6,9 +6,9 @@ name: CI-min
 on:
   # Triggers the workflow on push or pull request events but only for the main branch
   push:
-    branches: [ dev, release/* ]
+    branches: [dev, release/*]
   pull_request:
-    branches: [ dev, release/* ]
+    branches: [dev, release/*]
 
   # Allows you to run this workflow manually from the Actions tab
   workflow_dispatch:
@@ -18,12 +18,12 @@ jobs:
   # This workflow contains a single job called "build"
   build:
     # The type of runner that the job will run on
-    runs-on:  ${{ matrix.platform }}
+    runs-on: ${{ matrix.platform }}
     strategy:
       max-parallel: 5
       matrix:
         platform: [ubuntu-latest]
-        python-version: [3.9]
+        python-version: [3.11]
 
     # Steps represent a sequence of tasks that will be executed as part of the job
     steps:

.github/workflows/ci-python-notebooks.yml

@@ -6,9 +6,9 @@ name: CI-notebooks
 on:
   # Triggers the workflow on push or pull request events but only for the main branch
   push:
-    branches: [ main, dev, release/* ]
+    branches: [main, dev, release/*]
   pull_request:
-    branches: [ main, dev, release/* ]
+    branches: [main, dev, release/*]
 
   # Allows you to run this workflow manually from the Actions tab
   workflow_dispatch:
@@ -18,12 +18,12 @@ jobs:
   # This workflow contains a single job called "build"
   build:
     # The type of runner that the job will run on
-    runs-on:  ${{ matrix.platform }}
+    runs-on: ${{ matrix.platform }}
     strategy:
       max-parallel: 5
       matrix:
         platform: [ubuntu-latest]
-        python-version: [3.8]
+        python-version: [3.11]
 
     # Steps represent a sequence of tasks that will be executed as part of the job
     steps:

.github/workflows/ci-python.yml

@@ -6,9 +6,9 @@ name: CI
 on:
   # Triggers the workflow on push or pull request events but only for the main branch
   push:
-    branches: [ main ]
+    branches: [main]
   pull_request:
-    branches: [ main ]
+    branches: [main]
 
   # Allows you to run this workflow manually from the Actions tab
   workflow_dispatch:
@@ -18,12 +18,12 @@ jobs:
   # This workflow contains a single job called "build"
   build:
     # The type of runner that the job will run on
-    runs-on:  ${{ matrix.platform }}
+    runs-on: ${{ matrix.platform }}
     strategy:
       max-parallel: 5
       matrix:
         platform: [ubuntu-latest, macos-latest, windows-latest]
-        python-version: [3.8, 3.9, "3.10", "3.11"]
+        python-version: [3.8, 3.9, "3.10", "3.11", "3.12"]
 
     # Steps represent a sequence of tasks that will be executed as part of the job
     steps:
@@ -47,4 +47,4 @@ jobs:
       - name: Doc Test
         if: matrix.platform == 'ubuntu-latest'
         run: |
-          poetry run pytest --doctest-modules pams          
+          poetry run pytest --doctest-modules pams

.github/workflows/codecov.yml

@@ -6,9 +6,9 @@ name: codecov CI
 on:
   # Triggers the workflow on push or pull request events but only for the main branch
   push:
-    branches: [ main, dev, release/* ]
+    branches: [main, dev, release/*]
   pull_request:
-    branches: [ main ]
+    branches: [main]
 
   # Allows you to run this workflow manually from the Actions tab
   workflow_dispatch:
@@ -21,26 +21,26 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.9]
+        python-version: [3.11]
 
     # Steps represent a sequence of tasks that will be executed as part of the job
     steps:
-    - uses: actions/checkout@v2
-    - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/[email protected]
-      with:
-        python-version: ${{ matrix.python-version }}
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip setuptools wheel
-        python -m pip install poetry
-        poetry install
-    - name: make cov report
-      run: |
-        poetry run pytest --cov=./ --cov-report=xml
-    - uses: codecov/codecov-action@v2
-      with:
-        token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos
-        files: ./coverage.xml
-        flags: pytest
-        verbose: true
+      - uses: actions/checkout@v2
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/[email protected]
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip setuptools wheel
+          python -m pip install poetry
+          poetry install
+      - name: make cov report
+        run: |
+          poetry run pytest --cov=./ --cov-report=xml
+      - uses: codecov/codecov-action@v2
+        with:
+          token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos
+          files: ./coverage.xml
+          flags: pytest
+          verbose: true

.github/workflows/doc.yml

@@ -8,12 +8,12 @@ on:
 
 jobs:
   doc:
-    runs-on:  ${{ matrix.platform }}
+    runs-on: ${{ matrix.platform }}
     strategy:
       max-parallel: 5
       matrix:
         platform: [ubuntu-latest]
-        python-version: [3.9]
+        python-version: [3.11]
     steps:
       - uses: actions/checkout@v2
       - name: Set up Python ${{ matrix.python-version }}