tests for new descendants

maximsch2 · Mar 31, 2017 · 7c33e1e · 7c33e1e
1 parent 46a1116
commit 7c33e1e
Show file tree

Hide file tree

Showing 3 changed files with 14 additions and 3 deletions.
diff --git a/test/data/go_mini.obo b/test/data/go_mini.obo
@@ -26,3 +26,10 @@ name: five
 namespace: biological_process
 def: DDD
 is_a: GO:0000004
+
+[Term]
+id: GO:0000006
+name: six
+namespace: biological_process
+def: EEE
+relationship: part_of GO:0000005
diff --git a/test/test_graph.jl b/test/test_graph.jl
@@ -10,6 +10,7 @@ end
     term2 = gettermbyid(GO, 2)
     term4 = gettermbyid(GO, 4)
     term5 = gettermbyid(GO, 5)
+    term6 = gettermbyid(GO, 6)
 
     test_isa(GO, term1, term2)
     test_isa(GO, term4, term2)
@@ -34,4 +35,6 @@ end
 
     @test Set(descendants(GO, term2)) == Set([term1, term4, term5])
     @test descendants(GO, term5) == []
+
+    @test Set(descendants(GO, term2, [:is_a, :part_of])) == Set([term1, term4, term5, term6])
 end
diff --git a/test/test_parser.jl b/test/test_parser.jl
@@ -10,21 +10,22 @@ end
 
 @testset "parseOBO() tests" begin
     header, stanzas = parseOBO("$testdir/data/go_mini.obo")
-    @test length(stanzas) == 4
+    @test length(stanzas) == 5
     @test header["format-version"] == ["1.2"]
 
     terms = getterms(stanzas)
-    @test length(terms) == 4
+    @test length(terms) == 5
 end
 
 @testset "load() tests" begin
     GO = OBOParse.load("$testdir/data/go_mini.obo", "GO")
 
-    @test length(GO) == 4
+    @test length(GO) == 5
     @test GO["GO:0000002"].name == "two"
     @test GO["GO:0000001"].name == "one"
     @test GO["GO:0000004"].name == "four"
     @test GO["GO:0000005"].name == "five"
+    @test GO["GO:0000006"].name == "six"
 end
 
 @testset "test parse GO" begin