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Merge pull request #8 from maximsch2/julia_1
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Julia 1.x compatibility
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alyst authored Nov 23, 2023
2 parents 4c84576 + 984b187 commit af085b7
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7 changes: 7 additions & 0 deletions .github/dependabot.yml
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# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
version: 2
updates:
- package-ecosystem: "github-actions"
directory: "/" # Location of package manifests
schedule:
interval: "weekly"
56 changes: 56 additions & 0 deletions .github/workflows/CI.yml
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name: CI

on:
push:
branches:
- master
- release-*
tags: '*'
pull_request:

concurrency:
# Skip intermediate builds: always.
# Cancel intermediate builds: only if it is a pull request build.
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }}

jobs:
test:
name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }}
runs-on: ${{ matrix.os }}
continue-on-error: ${{ matrix.version == 'nightly' }}
strategy:
fail-fast: false
matrix:
version:
- '1.0'
- '1'
- 'nightly'
os:
- ubuntu-latest
- windows-latest
- macos-latest
arch:
- x64
- x86
exclude:
- os: macos-latest
arch: x86
steps:
- uses: actions/checkout@v3
- uses: julia-actions/setup-julia@v1
with:
version: ${{ matrix.version }}
arch: ${{ matrix.arch }}
show-versioninfo: true
- uses: julia-actions/cache@v1
- uses: julia-actions/julia-buildpkg@v1
- uses: julia-actions/julia-runtest@v1
- uses: julia-actions/julia-processcoverage@v1
#- uses: codecov/codecov-action@v3
# with:
# file: lcov.info
#- uses: coverallsapp/[email protected]
# with:
# github-token: ${{ secrets.GITHUB_TOKEN }}
# path-to-lcov: lcov.info
7 changes: 0 additions & 7 deletions .travis.yml

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13 changes: 13 additions & 0 deletions Project.toml
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name = "OBOParse"
uuid = "afb48802-0cf5-5a61-b18d-a3da2e9c5fb6"
authors = ["Maxim Grechkin"]
version = "0.1.0"

[deps]
Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"

[extras]
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[targets]
test = ["Test"]
2 changes: 1 addition & 1 deletion README.md
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# OBO Ontology parser

[![Build Status](https://travis-ci.org/maximsch2/OBOParse.jl.svg?branch=master)](https://travis-ci.org/maximsch2/OBOParse.jl)
[![CI](https://github.com/maximsch2/OBOParse.jl/workflows/CI/badge.svg?branch=master)](https://github.com/maximsch2/OBOParse.jl/actions?query=workflow%3ACI+branch%3Amaster)

Rewrite of [GeneOntology.jl](https://github.com/bicycle1885/GeneOntology.jl)'s OBO parser to be more robust and not specific to Gene Ontology.
1 change: 0 additions & 1 deletion REQUIRE

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