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1. STRS STRS Public

   Suite of analysis tools for spatial total RNA-sequencing

   R 11 2

2. slide_snake slide_snake Public

   Snakemake workflow for the preprocessing, alignment, QC, and quantification of spatial transcriptomics data

   Jupyter Notebook 6 5

3. microSTRS microSTRS Public

   Forked from ntekasi/microSTRS

   Code repository associated with our recent work: Spatial RNA-Sequencing of Microbiome-Host Interactions at One Micron Resolution

   Jupyter Notebook

4. ref_snake ref_snake Public

   Snakemake workflow to automatically build and organize reference genomes for common alignment tasks

   JavaScript 2 1

5. scMuscle2 scMuscle2 Public

   Curation and analysis of skeletal muscle single-cell data across species

   Jupyter Notebook 2

6. scMuscle scMuscle Public

   The Cornell Single-Cell Muscle Project (scMuscle) aims to collect, analyze and provide to the research community skeletal muscle transcriptomic data

   HTML 20 4