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Update viromes.md
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asierFernandezP authored Oct 12, 2024
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Expand Up @@ -90,7 +90,7 @@ The CheckV output is described [here](https://bitbucket.org/berkeleylab/checkv/s

We will use **iPHoP** for bacterial host assignment of the viruses. Although iPHoP provides both genus- and species-level host predictions, we will focus solely on genus-level assignments. This is because iPHoP offers high-confidence predictions at the genus level (with an estimated false discovery rate of less than 10%), while the confidence decreases at the species level.

**Note:** The following command can take several hours. Therefore, you should continue with the results in ``/data/precomputed/virome/iphop_results/``.
**Note:** The following command can take around 1 hour. Therefore, you should continue with the results in ``/data/precomputed/virome/iphop_results/``.
```bash
mkdir iphop_results

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