# cd /hoge
# mkdir data
# cd data
Download data from https://sites.google.com/site/jpopgen/dbNSFP
Get the source code of this tool from github.
# cd /hoge
# git clone https://github.com/med2rdf/dbnsfp.git
# cd dbnsfp
Run docker commands.
# docker build -t dbnsfp .
For proxy
#docker build -t dbnsfp --build-arg HTTPS_PROXY=http://hoge:8080 .
Now, let's make RDFs!
# docker run -v /hoge/data:/data dbnsfp ruby /work/mkRDFdbNSFP.rb /work/academic.conf /data/dbNSFPxxxa.chrx
- Replace dbNSFPxxxa.chrx with the name of the downloaded file when you execute this command.
It outputs /hoge/data/dbNSFPxxxa.chrx.ttl .
- You can replace academic.conf for customizing the rdf.
This schema was drawed by https://www.kanzaki.com/works/2009/pub/graph-draw