Code

Feature/classify query#71

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Merged

adraismawur merged 16 commits intodevmedema-group/BiG-SCAPE:devfrom feature/classify-querymedema-group/BiG-SCAPE:feature/classify-queryCopy head branch name to clipboardNov 1, 2023

+648-112

Commits

Commits on Oct 26, 2023

• in query mode, perform family calling only on connected component that contains query BGC, output generation still needs to only include this cc, started implementation of classify for query BGC mode

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  6da4b3e

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Commits on Oct 27, 2023

• created connected_component pair generator to load only the query cc into the output for query mode

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  0772b98

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• added classification modes to query bgc, updated cli to exclude legacy classify from query BGC

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  bb64a5a

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• updated run information panel in overview html

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Commits on Oct 31, 2023

• added run_data to bigscape.js in order to highlight query node in network when running query mode

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• minor refactoring

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• ensure pair search is symmetrical in missing record pair generator

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  466a08b

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• minor refactoring

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• minor refactoring

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  14d8cc5

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• include singletons in info panel

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• added cull singletons method to recordpairgenerator

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Commits on Nov 1, 2023

• minor refactoring

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• do not produce output if network is empty after singleton culling

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• minor refactoring

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• take source type out of the database and add to gbk objs upon loading. adjust query bgc distance calculation and tests

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  dbe00a3

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• PR fixes

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