Loading Concept Reference Range Configurations

api-2.3/src/test/java/org/openmrs/module/initializer/api/loaders/LoadersOrderTest.java

@@ -73,6 +73,7 @@ protected boolean matchesSafely(List<Loader> loaders, Description mismatchDescri
 			exclude.add(Domain.PAYMENT_MODES.getName());
 			exclude.add(Domain.BILLABLE_SERVICES.getName());
 			exclude.add(Domain.CASH_POINTS.getName());
+			exclude.add(Domain.CONCEPT_REFERENCE_RANGE.getName());
 
 			boolean result = true;
 			Set<String> loaderDomains = loaders.stream().map(Loader::getDomainName).collect(Collectors.toSet());

api-2.7/pom.xml

@@ -0,0 +1,53 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0"
+         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+    <parent>
+        <artifactId>initializer</artifactId>
+        <groupId>org.openmrs.module</groupId>
+        <version>2.8.0-SNAPSHOT</version>
+    </parent>
+    <modelVersion>4.0.0</modelVersion>
+
+    <artifactId>initializer-api-2.7</artifactId>
+    <packaging>jar</packaging>
+    <name>Initializer API 2.7</name>
+    <description>API 2.7 project for Initializer</description>
+
+    <properties>
+        <openmrsPlatformVersion>${openmrsVersion2.7}</openmrsPlatformVersion>
+    </properties>
+
+    <dependencies>
+
+        <dependency>
+            <groupId>org.openmrs.test</groupId>
+            <artifactId>openmrs-test</artifactId>
+            <type>pom</type>
+            <version>${openmrsPlatformVersion}</version>
+            <scope>test</scope>
+            <exclusions>
+                <exclusion>
+                    <groupId>org.powermock</groupId>
+                    <artifactId>powermock-api-mockito2</artifactId>
+                </exclusion>
+            </exclusions>
+        </dependency>
+
+        <dependency>
+            <groupId>${project.parent.groupId}</groupId>
+            <artifactId>${project.parent.artifactId}-api</artifactId>
+            <version>${project.parent.version}</version>
+            <scope>provided</scope>
+        </dependency>
+
+        <dependency>
+            <groupId>${project.parent.groupId}</groupId>
+            <artifactId>${project.parent.artifactId}-api</artifactId>
+            <version>${project.parent.version}</version>
+            <scope>test</scope>
+            <type>test-jar</type>
+        </dependency>
+    </dependencies>
+
+</project>

api-2.7/src/main/java/org/openmrs/module/initializer/api/conceptreferencerange/ConceptReferenceRangeLineProcessor.java

@@ -0,0 +1,55 @@
+package org.openmrs.module.initializer.api.conceptreferencerange;
+
+import org.openmrs.api.ConceptService;
+import org.openmrs.module.initializer.api.BaseLineProcessor;
+import org.openmrs.module.initializer.api.CsvLine;
+import org.springframework.beans.factory.annotation.Qualifier;
+import org.springframework.stereotype.Component;
+import org.openmrs.ConceptReferenceRange;
+
+@Component
+public class ConceptReferenceRangeLineProcessor extends BaseLineProcessor<ConceptReferenceRange> {
+
+	private final String HEADER_CONCEPT_NUMERIC_UUID = "Concept Numeric UUID";
+
+	private final String HEADER_ABSOLUTE_LOW = "Absolute Low";
+
+	private final String HEADER_ABSOLUTE_HIGH = "Absolute High";
+
+	private final String HEADER_CRITICAL_LOW = "Critical Low";
+
+	private final String HEADER_CRITICAL_HIGH = "Critical High";
+
+	private final String HEADER_NORMAL_LOW = "Normal Low";
+
+	private final String HEADER_NORMAL_HIGH = "Normal High";
+
+	private final String HEADER_CRITERIA = "Criteria";
+
+	private final ConceptService conceptService;
+
+	public ConceptReferenceRangeLineProcessor(@Qualifier("conceptService") ConceptService conceptService) {
+		this.conceptService = conceptService;
+	}
+
+	public ConceptReferenceRange fill(ConceptReferenceRange instance, CsvLine line) throws IllegalArgumentException {
+		ConceptReferenceRange conceptReferenceRange = new ConceptReferenceRange();
+
+		if (instance.getUuid() != null) {
+			conceptReferenceRange = conceptService.getConceptReferenceRangeByUuid(instance.getUuid());
+		}
+
+		conceptReferenceRange
+		        .setConceptNumeric(conceptService.getConceptNumericByUuid(line.get(HEADER_CONCEPT_NUMERIC_UUID)));
+		conceptReferenceRange.setHiAbsolute(line.getDouble(HEADER_ABSOLUTE_HIGH));
+		conceptReferenceRange.setLowAbsolute(line.getDouble(HEADER_ABSOLUTE_LOW));
+		conceptReferenceRange.setHiCritical(line.getDouble(HEADER_CRITICAL_HIGH));
+		conceptReferenceRange.setLowCritical(line.getDouble(HEADER_CRITICAL_LOW));
+		conceptReferenceRange.setHiNormal(line.getDouble(HEADER_NORMAL_HIGH));
+		conceptReferenceRange.setLowNormal(line.getDouble(HEADER_NORMAL_LOW));
+		conceptReferenceRange.setCriteria(line.getString(HEADER_CRITERIA));
+
+		return conceptReferenceRange;
+
+	}
+}

api-2.7/src/main/java/org/openmrs/module/initializer/api/conceptreferencerange/ConceptReferenceRangeLoader.java

@@ -0,0 +1,24 @@
+package org.openmrs.module.initializer.api.conceptreferencerange;
+
+import org.openmrs.ConceptReferenceRange;
+import org.openmrs.annotation.OpenmrsProfile;
+import org.openmrs.module.initializer.api.loaders.BaseCsvLoader;
+import org.springframework.beans.factory.annotation.Autowired;
+import org.springframework.stereotype.Component;
+
+import java.io.File;
+
+@OpenmrsProfile(openmrsPlatformVersion = "2.7.x")
+@Component
+public class ConceptReferenceRangeLoader extends BaseCsvLoader<ConceptReferenceRange, ConceptReferenceRangeParser> {
+
+	@Autowired
+	public void setParser(ConceptReferenceRangeParser parser) {
+		this.parser = parser;
+	}
+
+	@Override
+	protected void preload(File file) {
+	}
+
+}

api-2.7/src/main/java/org/openmrs/module/initializer/api/conceptreferencerange/ConceptReferenceRangeParser.java

@@ -0,0 +1,45 @@
+package org.openmrs.module.initializer.api.conceptreferencerange;
+
+import org.openmrs.ConceptReferenceRange;
+import org.openmrs.api.ConceptService;
+import org.openmrs.module.initializer.Domain;
+import org.openmrs.module.initializer.api.BaseLineProcessor;
+import org.openmrs.module.initializer.api.CsvLine;
+import org.openmrs.module.initializer.api.CsvParser;
+import org.springframework.beans.factory.annotation.Qualifier;
+import org.springframework.stereotype.Component;
+
+@Component
+public class ConceptReferenceRangeParser extends CsvParser<ConceptReferenceRange, BaseLineProcessor<ConceptReferenceRange>> {
+
+	private ConceptService conceptService;
+
+	public ConceptReferenceRangeParser(@Qualifier("conceptService") ConceptService conceptService,
+	    ConceptReferenceRangeLineProcessor lineProcessor) {
+		super(lineProcessor);
+		this.conceptService = conceptService;
+	}
+
+	@Override
+	public ConceptReferenceRange bootstrap(CsvLine line) throws IllegalArgumentException {
+		String uuid = line.getUuid();
+		ConceptReferenceRange conceptReferenceRange = conceptService.getConceptReferenceRangeByUuid(uuid);
+
+		if (conceptReferenceRange == null) {
+			conceptReferenceRange = new ConceptReferenceRange();
+			conceptReferenceRange.setUuid(uuid);
+		}
+
+		return conceptReferenceRange;
+	}
+
+	@Override
+	public ConceptReferenceRange save(ConceptReferenceRange instance) {
+		return conceptService.saveConceptReferenceRange(instance);
+	}
+
+	@Override
+	public Domain getDomain() {
+		return Domain.CONCEPT_REFERENCE_RANGE;
+	}
+}

api-2.7/src/test/java/org/openmrs/module/initializer/api/loaders/ConceptReferenceRangeLoaderIntegrationTest.java

@@ -0,0 +1,33 @@
+package org.openmrs.module.initializer.api.loaders;
+
+import org.junit.Test;
+import org.junit.Before;
+import org.openmrs.ConceptReferenceRange;
+import org.openmrs.api.ConceptService;
+import org.openmrs.module.initializer.DomainBaseModuleContextSensitiveTest;
+import org.openmrs.module.initializer.api.c.ConceptClassesLoader;
+import org.springframework.beans.factory.annotation.Autowired;
+import org.springframework.beans.factory.annotation.Qualifier;
+
+public class ConceptReferenceRangeLoaderIntegrationTest extends DomainBaseModuleContextSensitiveTest {
+
+	@Autowired
+	@Qualifier("conceptService")
+	private ConceptService conceptService;
+
+	@Autowired
+	private ConceptClassesLoader loader;
+
+	@Before
+	public void setup() {
+		loader = new ConceptClassesLoader();
+	}
+
+	@Test
+	public void load_shouldLoadConceptReferenceRangesAccordingToCsvFiles() {
+		loader.load();
+		ConceptReferenceRange conceptReferenceRange = conceptService
+		        .getConceptReferenceRangeByUuid("bc059100-4ace-4af5-afbf-2da7f3a34acf");
+	}
+
+}

api-2.7/src/test/resources/testAppDataDir.configuration/conceptreferencerange/conceptreferencerange.csv

@@ -0,0 +1,4 @@
+Uuid,Concept Numeric Uuid,Absolute low,Critical low,Normal low,Normal high,Critical high,Absolute high,Criteria
+bc059100-4ace-4af5-afbf-2da7f3a34acf,3f881c96-485a-482a-9d57-80e917aa2500,-100.5,-85.7,-50.3,45.1,78,98.8, $patient.getAge() > 3
+930e1fb4-490d-45fe-a137-0cd941c76124,3f881c96-485a-482a-9d57-80e917aa2500,-100.5,-85.7,-50.3,45.1,78,98.8, $patient.getAge() < 10
+b5a7b296-e500-4a2c-ab2e-eb012ed9ae1e,3f881c96-485a-482a-9d57-80e917aa2500,60,70,80,120,130,150, $fn.getCurrentHour() > 2

api/src/main/java/org/openmrs/module/initializer/Domain.java

@@ -53,7 +53,8 @@ public enum Domain {
 	AMPATH_FORMS,
 	AMPATH_FORMS_TRANSLATIONS,
 	HTML_FORMS,
-	DISPOSITIONS;
+	DISPOSITIONS,
+	CONCEPT_REFERENCE_RANGE;
 
 	public int getOrder() {
 		return ArrayUtils.indexOf(values(), this) + 1;

pom.xml

@@ -39,6 +39,7 @@
         <module>api-2.3</module>
         <module>api-2.4</module>
         <module>api-2.5</module>
+        <module>api-2.7</module>
         <module>omod</module>
     </modules>
 
@@ -58,6 +59,7 @@
         <openmrsVersion2.3>2.3.6</openmrsVersion2.3>
         <openmrsVersion2.4>2.4.5</openmrsVersion2.4>
         <openmrsVersion2.5>2.5.5</openmrsVersion2.5>
+        <openmrsVersion2.7>2.7.0</openmrsVersion2.7>
 
         <openmrsPlatformVersion>${openmrsVersion2.1}</openmrsPlatformVersion>