Merge pull request #458 from yanhui09/master

eggnog_proteins.dmnd needed for tmpfs
metagenome-atlas · Oct 4, 2021 · fbed90e · fbed90e
2 parents b9ff1d6 + 5995562
commit fbed90e
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/atlas/rules/genecatalog.smk b/atlas/rules/genecatalog.smk
@@ -401,6 +401,7 @@ rule eggNOG_annotation:
         if [ {params.copyto_shm} == "t" ] ;
         then
             cp {EGGNOG_DIR}/eggnog.db {params.data_dir}/eggnog.db 2> {log}
+            cp {EGGNOG_DIR}/eggnog_proteins.dmnd {params.data_dir}/eggnog_proteins.dmnd 2>> {log}
         fi
 
         emapper.py --annotate_hits_table {input.seed} --no_file_comments \