Test Pull Requests #1052
Manually triggered
February 13, 2025 06:46
pbelmann
Status
Cancelled
Total duration
1d 0h 23m 56s
Artifacts
–
workflow_modules.yml
on: workflow_dispatch
settings
1m 26s
cplex_docker
14s
full_pipeline
8h 22m
full_pipeline_ont
7h 33m
qc
2h 34m
external_SRA
7m 20s
mag_attributes
6h 10m
dereplication
2m 30s
quickstart
4h 54m
readmapping
4m 34s
assembly
2h 56m
cooccurrence
3m 39s
fragment_recruitment
9m 25s
annotation
46m 57s
annotation_database_tests_part_1
5h 56m
annotation_database_tests_part_2
1h 25m
external_S3_annotation_database
21s
external_gtdb_S3_mag_attributes
2h 28m
metabolomics
5s
plasmid
5s
Annotations
9 errors and 1 warning
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cplex_docker
Process completed with exit code 1.
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full_pipeline_ont
Process completed with exit code 1.
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external_S3_annotation_database
File was unable to be removed Error: EACCES: permission denied, unlink '/vol/spool/actions-runner3/_work/metagenomics-tk/metagenomics-tk/databases/checkm2/lock.txt'
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metabolomics
File was unable to be removed Error: EACCES: permission denied, rmdir '/vol/spool/actions-runner3/_work/metagenomics-tk/metagenomics-tk/databases/mmseqs2/bacmet20_experimental'
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plasmid
File was unable to be removed Error: EACCES: permission denied, unlink '/vol/spool/actions-runner3/_work/metagenomics-tk/metagenomics-tk/databases/checkm2/md5sum.txt'
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external_gtdb_S3_mag_attributes
The run was canceled by @pbelmann.
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external_gtdb_S3_mag_attributes
The operation was canceled.
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annotation_database_tests_part_1
The run was canceled by @pbelmann.
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annotation_database_tests_part_1
The operation was canceled.
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external_S3_annotation_database
Unable to clean or reset the repository. The repository will be recreated instead.
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