Address issues with SWIG4.2 #99
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Test_with_MFEM_release | |
| on: | |
| pull_request: | |
| types: | |
| - labeled | |
| #push: | |
| # branches: [ test ] | |
| #pull_request: | |
| # branches: [ test ] | |
| # types: [synchronize] | |
| jobs: | |
| build: | |
| if: contains(github.event.pull_request.labels.*.name, 'in-test-with-mfem-release') | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.7", "3.8", "3.9"] | |
| #python-version: ["3.10"] | |
| #os: [ubuntu-latest] | |
| os: [ubuntu-20.04] | |
| # USE_FLAGS : cuda, parallel, libceed | |
| env: | |
| - { USE_FLAGS: "000"} | |
| - { USE_FLAGS: "010"} | |
| include: | |
| - os: macos-latest | |
| python-version: 3.9 | |
| env: {USE_FLAGS: "000"} | |
| runs-on: ${{ matrix.os }} | |
| #env: ${{ matrix.env }} | |
| env: | |
| USE_FLAGS: ${{ matrix.env.USE_FLAGS }} | |
| CUDA: "11.5" | |
| SANDBOX: ~/sandbox | |
| steps: | |
| - uses: actions/checkout@v3 | |
| # with: | |
| # ref: master_tracking_branch | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| #python -m pip install --upgrade pip setuptools wheel | |
| python -c "import setuptools;print(setuptools.__version__)" | |
| PYTHONLIB=~/sandbox/lib/python${{ matrix.python-version }}/site-packages | |
| mkdir -p $PYTHONLIB | |
| export PYTHONPATH=$PYTHONLIB:$PYTHONPATH | |
| echo "PYTHONPATH:"$PYTHONPATH | |
| pip install six --verbose | |
| if [ "${{matrix.python-version}}" = "3.10" ] ; then | |
| pip install numba numba-scipy --verbose | |
| #pip install scipy | |
| else | |
| pip install numba numba-scipy --verbose | |
| fi | |
| if [ -f requirements.txt ]; then | |
| pip install -r requirements.txt --prefix=~/sandbox --verbose | |
| fi | |
| python -c "import sys;print(sys.path)" | |
| python -c "import numpy;print(numpy.__file__)" | |
| which swig # this default is 4.0.1 | |
| pip install swig --prefix=~/sandbox | |
| export PATH=/usr/local/cuda-${CUDA}/bin:~/sandbox/bin:$PATH | |
| which swig | |
| swig -version | |
| if [ "${USE_FLAGS:0:1}" = "1" ] ; then | |
| echo $cuda | |
| source ./ci_scripts/add_cuda_11_5.sh; | |
| fi | |
| if [ "${USE_FLAGS:1:1}" = "1" ] ; then | |
| sudo apt-get install mpich; | |
| sudo apt-get install libmpich-dev; | |
| pip install mpi4py --prefix=~/sandbox | |
| #pip install mpi4py --no-cache-dir --prefix=~/sandbox; | |
| #python -m pip install git+https://github.com/mpi4py/mpi4py | |
| python -c "import mpi4py;print(mpi4py.get_include())"; | |
| fi | |
| ls -l $PYTHONLIB | |
| - name: Build | |
| run: | | |
| export PATH=/usr/local/cuda-${CUDA}/bin:~/sandbox/bin:$PATH | |
| PYTHONLIB=~/sandbox/lib/python${{ matrix.python-version }}/site-packages | |
| export PYTHONPATH=$PYTHONLIB:$PYTHONPATH | |
| echo $PATH | |
| echo $PYTHONPATH | |
| echo $SANDBOX | |
| echo "SWIG exe"$(which swig) | |
| if [ "${USE_FLAGS}" = "000" ]; then | |
| # test workflow to manually run swig | |
| python setup.py clean --swig | |
| python setup.py install --ext-only --with-gslib --verbose | |
| python setup.py install --swig --with-gslib --verbose | |
| python setup.py install --skip-ext --skip-swig --with-gslib --verbose | |
| fi | |
| if [ "${USE_FLAGS}" = "010" ]; then | |
| python setup.py install --with-gslib --with-parallel --prefix=$SANDBOX | |
| fi | |
| - name: RUN_EXAMPLES | |
| run: | | |
| export PATH=/usr/local/cuda-${CUDA}/bin:$PATH | |
| PYTHONLIB=~/sandbox/lib/python${{ matrix.python-version }}/site-packages | |
| export PYTHONPATH=$PYTHONLIB:$PYTHONPATH | |
| echo $PATH | |
| echo $PYTHONPATH | |
| echo $SANDBOX | |
| cd test | |
| echo $PATH | |
| echo $PYTHONPATH | |
| if [ "${USE_FLAGS}" = "000" ]; then | |
| python run_examples.py -serial -verbose | |
| fi | |
| if [ "${USE_FLAGS}" = "010" ]; then | |
| which mpicc | |
| python run_examples.py -parallel -verbose -np 2 | |
| fi | |
| - name: Generate Artifact | |
| if: always() | |
| run: | | |
| tar -cvzf sandbox.tar.gz test/sandbox | |
| - name: Generate artifact name | |
| if: always() | |
| id: generate-name | |
| run: | | |
| txt=$(python -c "import datetime;print(datetime.datetime.now().strftime('%H_%M_%S_%f'))") | |
| name="test_result_"${txt}"_"${{ github.run_id }}".tar.gz" | |
| echo $name | |
| # (deprecated) echo "::set-output name=artifact::${name}" | |
| echo "artifact=${name}" >> $GITHUB_OUTPUT | |
| - name: Upload Artifact | |
| uses: actions/upload-artifact@v3 | |
| if: failure() | |
| with: | |
| name: ${{ steps.generate-name.outputs.artifact }} | |
| path: sandbox.tar.gz | |
| retention-days: 1 |