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CLN: Lint with isort
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mferrera committed Oct 2, 2023
1 parent 4b41eb3 commit a421f73
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Showing 59 changed files with 92 additions and 49 deletions.
12 changes: 4 additions & 8 deletions src/xtgeo/common/__init__.py
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"""The XTGeo common package"""


# flake8: noqa
from xtgeo.common.xtgeo_dialog import XTGeoDialog
from xtgeo.common.xtgeo_dialog import XTGDescription
from xtgeo.common.xtgeo_dialog import XTGShowProgress

from xtgeo.common.sys import _XTGeoFile
from xtgeo.common.sys import inherit_docstring

from xtgeo.common.exceptions import WellNotFoundError
from xtgeo.common.sys import _XTGeoFile, inherit_docstring

# flake8: noqa
from xtgeo.common.xtgeo_dialog import XTGDescription, XTGeoDialog, XTGShowProgress
4 changes: 3 additions & 1 deletion src/xtgeo/cube/__init__.py
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# -*- coding: utf-8 -*-
"""The XTGeo cube package."""

from xtgeo.cube.cube1 import Cube # type: ignore # noqa # pylint: disable=undefined-variable
from xtgeo.cube.cube1 import ( # type: ignore # noqa # pylint: disable=undefined-variable
Cube,
)
6 changes: 3 additions & 3 deletions src/xtgeo/cube/_cube_export.py
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@@ -1,15 +1,15 @@
"""Export Cube data via SegyIO library or XTGeo CLIB."""
import json
import shutil
import struct
import json
import numpy as np

import numpy as np
import segyio

import xtgeo
import xtgeo.cxtgeo._cxtgeo as _cxtgeo
from xtgeo.common import XTGeoDialog
from xtgeo import XTGeoCLibError
from xtgeo.common import XTGeoDialog

xtg = XTGeoDialog()

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2 changes: 1 addition & 1 deletion src/xtgeo/grid3d/__init__.py
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from ._ecl_grid import GridRelative, Units
from .grid import Grid
from .grid_property import GridProperty
from .grid_properties import GridProperties
from .grid_property import GridProperty
2 changes: 1 addition & 1 deletion src/xtgeo/grid3d/_grid3d_fence.py
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import numpy as np

import xtgeo
import xtgeo.cxtgeo._cxtgeo as _cxtgeo
from xtgeo.grid3d import _gridprop_lowlevel as gl
from xtgeo.surface import _regsurf_lowlevel as rl
import xtgeo.cxtgeo._cxtgeo as _cxtgeo

xtg = xtgeo.common.XTGeoDialog()
logger = xtg.functionlogger(__name__)
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3 changes: 2 additions & 1 deletion src/xtgeo/grid3d/_grid_etc1.py
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from collections import OrderedDict
from copy import deepcopy
from packaging.version import parse as versionparse
from math import atan2, degrees
from typing import Tuple

import numpy as np
import numpy.ma as ma
import pandas as pd
from packaging.version import parse as versionparse

import xtgeo
import xtgeo.cxtgeo._cxtgeo as _cxtgeo
from xtgeo.common import XTGeoDialog
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3 changes: 2 additions & 1 deletion src/xtgeo/grid3d/_grid_refine.py
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@@ -1,10 +1,11 @@
# -*- coding: utf-8 -*-
"""Private module for refinement of a grid."""
from collections import OrderedDict

import numpy as np

from xtgeo.common import XTGeoDialog
import xtgeo.cxtgeo._cxtgeo as _cxtgeo
from xtgeo.common import XTGeoDialog

xtg = XTGeoDialog()

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1 change: 1 addition & 0 deletions src/xtgeo/grid3d/_grid_wellzone.py
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@@ -1,6 +1,7 @@
"""Private module for grid vs well zonelog checks."""

import numpy as np

import xtgeo

xtg = xtgeo.common.XTGeoDialog()
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1 change: 1 addition & 0 deletions src/xtgeo/grid3d/_gridprop_import_roff.py
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import warnings

import numpy as np

import xtgeo

from ._roff_parameter import RoffParameter
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2 changes: 1 addition & 1 deletion src/xtgeo/grid3d/_gridprop_op1.py
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import numpy as np

import xtgeo
import xtgeo.cxtgeo._cxtgeo as _cxtgeo
from xtgeo.common import XTGeoDialog
from xtgeo.grid3d import _gridprop_lowlevel as gl
import xtgeo.cxtgeo._cxtgeo as _cxtgeo

xtg = XTGeoDialog()

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3 changes: 2 additions & 1 deletion src/xtgeo/grid3d/_gridprops_import_eclrun.py
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@@ -1,8 +1,9 @@
from copy import deepcopy
from typing import List, Tuple, Union

import xtgeo
from typing_extensions import Literal

import xtgeo
from xtgeo.common.constants import MAXKEYWORDS

from . import _grid3d_utils as utils
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3 changes: 1 addition & 2 deletions src/xtgeo/metadata/__init__.py
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# flake8: noqa
"""XTGeo metadata package."""

from xtgeo.metadata.metadata import MetaDataRegularSurface
from xtgeo.metadata.metadata import MetaDataRegularCube
from xtgeo.metadata.metadata import MetaDataRegularCube, MetaDataRegularSurface
3 changes: 2 additions & 1 deletion src/xtgeo/plot/__init__.py
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"""The XTGeo plot package"""


from xtgeo.plot.grid3d_slice import Grid3DSlice

# flake8: noqa
from xtgeo.plot.xsection import XSection
from xtgeo.plot.xtmap import Map
from xtgeo.plot.grid3d_slice import Grid3DSlice

# from ._colortables import random, random40, xtgeocolors, colorsfromfile
5 changes: 3 additions & 2 deletions src/xtgeo/plot/xtmap.py
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@@ -1,13 +1,14 @@
"""Module for map plots of surfaces, using matplotlib."""


import matplotlib.pyplot as plt
import matplotlib.patches as mplp
from matplotlib import ticker
import matplotlib.pyplot as plt
import numpy as np
import numpy.ma as ma
from matplotlib import ticker

from xtgeo.common import XTGeoDialog

from .baseplot import BasePlot

xtg = XTGeoDialog()
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1 change: 1 addition & 0 deletions src/xtgeo/surface/_regsurf_cube_window_v2.py
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import numpy as np

import xtgeo
import xtgeo.cxtgeo._cxtgeo as _cxtgeo
from xtgeo.common import XTGeoDialog
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1 change: 1 addition & 0 deletions src/xtgeo/surface/_regsurf_import.py
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import h5py
import numpy as np
import numpy.ma as ma

import xtgeo
import xtgeo.common.sys as xsys
import xtgeo.cxtgeo._cxtgeo as _cxtgeo # pylint: disable=no-name-in-module
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6 changes: 3 additions & 3 deletions src/xtgeo/well/__init__.py
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"""The XTGeo well package"""


from .blocked_well import BlockedWell
from .blocked_wells import BlockedWells

# flake8: noqa
from .well1 import Well
from .wells import Wells

from .blocked_well import BlockedWell
from .blocked_wells import BlockedWells
2 changes: 1 addition & 1 deletion src/xtgeo/well/_blockedwell_roxapi.py
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import pandas as pd

from xtgeo.common import XTGeoDialog
from xtgeo.roxutils import RoxUtils
from xtgeo.common.exceptions import WellNotFoundError
from xtgeo.roxutils import RoxUtils

try:
import roxar
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1 change: 1 addition & 0 deletions src/xtgeo/well/_blockedwells_roxapi.py
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from xtgeo.common import XTGeoDialog
from xtgeo.roxutils import RoxUtils

from .blocked_well import BlockedWell

xtg = XTGeoDialog()
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3 changes: 2 additions & 1 deletion src/xtgeo/well/_wellmarkers.py
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from collections import OrderedDict

import numpy as np
import pandas as pd

import xtgeo
import xtgeo.common.constants as const
import xtgeo.cxtgeo._cxtgeo as _cxtgeo
from xtgeo.common import XTGeoDialog
import xtgeo.common.constants as const

xtg = XTGeoDialog()
logger = xtg.functionlogger(__name__)
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4 changes: 2 additions & 2 deletions src/xtgeo/well/_wells_utils.py
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import logging

import numpy as np
import pandas as pd
import shapely.geometry as sg

from xtgeo.common import XTGeoDialog
from xtgeo.common import XTGShowProgress
from xtgeo.common import XTGeoDialog, XTGShowProgress

logger = logging.getLogger(__name__)
logger.addHandler(logging.NullHandler())
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3 changes: 2 additions & 1 deletion src/xtgeo/xyz/_xyz_lowlevel.py
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import numpy as np
from xtgeo.common import XTGeoDialog

import xtgeo.cxtgeo._cxtgeo as _cxtgeo
from xtgeo.common import XTGeoDialog

xtg = XTGeoDialog()

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3 changes: 1 addition & 2 deletions tests/conftest.py
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@@ -1,9 +1,8 @@
# -*- coding: utf-8 -*-
"""Conftest functions"""
from packaging.version import parse as versionparse

import pandas as pd
import pytest
from packaging.version import parse as versionparse


class Helpers:
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1 change: 1 addition & 0 deletions tests/test_common/test_calc.py
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import numpy as np
import pytest

import xtgeo
import xtgeo.common.calc as xcalc
import xtgeo.cxtgeo._cxtgeo as _cxtgeo
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3 changes: 2 additions & 1 deletion tests/test_cube/test_cube.py
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import numpy as np
import pytest
import segyio
import xtgeo
from hypothesis import HealthCheck, given, settings

import xtgeo
from xtgeo.common import XTGeoDialog
from xtgeo.cube import Cube
from xtgeo.cube._cube_import import (
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1 change: 1 addition & 0 deletions tests/test_cube/test_cube_deprecations.py
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import pytest

import xtgeo


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1 change: 1 addition & 0 deletions tests/test_etc/test_etc_make_avg_maps.py
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Expand Up @@ -2,6 +2,7 @@

import numpy as np
import pytest

import xtgeo
from xtgeo.common import XTGeoDialog
from xtgeo.surface import RegularSurface
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1 change: 1 addition & 0 deletions tests/test_grid3d/eclrun_fixtures.py
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@@ -1,6 +1,7 @@
from os.path import join

import pytest

import xtgeo


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1 change: 1 addition & 0 deletions tests/test_grid3d/test_ecl_inte_head.py
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@@ -1,5 +1,6 @@
import numpy as np
import pytest

from xtgeo.grid3d._ecl_inte_head import InteHead, Phases
from xtgeo.grid3d._ecl_output_file import Simulator, TypeOfGrid, UnitSystem

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1 change: 1 addition & 0 deletions tests/test_grid3d/test_eclrun.py
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import numpy as np
import pytest

import xtgeo

# pylint: disable=wildcard-import, unused-wildcard-import
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3 changes: 2 additions & 1 deletion tests/test_grid3d/test_grid.py
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Expand Up @@ -6,8 +6,9 @@

import numpy as np
import pytest
import xtgeo
from hypothesis import given

import xtgeo
from xtgeo.common import XTGeoDialog
from xtgeo.grid3d import Grid

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1 change: 1 addition & 0 deletions tests/test_grid3d/test_grid_bytesio.py
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Expand Up @@ -6,6 +6,7 @@
import io

import numpy as np

import xtgeo
from xtgeo.common import XTGeoDialog

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5 changes: 3 additions & 2 deletions tests/test_grid3d/test_grid_ecl_grid.py
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@@ -1,11 +1,12 @@
import hypothesis.strategies as st
import numpy as np
import pytest
from hypothesis import HealthCheck, assume, given, settings
from numpy.testing import assert_allclose

import xtgeo
import xtgeo.grid3d._egrid as xtg_egrid
import xtgeo.grid3d._grdecl_grid as ggrid
from hypothesis import HealthCheck, assume, given, settings
from numpy.testing import assert_allclose
from xtgeo.grid3d._ecl_grid import (
inverse_transform_xtgeo_coord_by_mapaxes,
transform_xtgeo_coord_by_mapaxes,
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3 changes: 2 additions & 1 deletion tests/test_grid3d/test_grid_egrid.py
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Expand Up @@ -5,9 +5,10 @@
import hypothesis.strategies as st
import numpy as np
import pytest
from hypothesis import HealthCheck, assume, given, settings

import xtgeo as xtg
import xtgeo.grid3d._egrid as xtge
from hypothesis import HealthCheck, assume, given, settings

from .egrid_generator import (
egrids,
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3 changes: 2 additions & 1 deletion tests/test_grid3d/test_grid_grdecl.py
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Expand Up @@ -5,10 +5,11 @@
import hypothesis.strategies as st
import numpy as np
import pytest
from hypothesis import HealthCheck, assume, given, settings

import xtgeo
import xtgeo.grid3d._ecl_grid as ecl_grid
import xtgeo.grid3d._grdecl_grid as ggrid
from hypothesis import HealthCheck, assume, given, settings
from xtgeo.grid3d import Grid
from xtgeo.grid3d._grdecl_format import open_grdecl
from xtgeo.grid3d._grid_import_ecl import grid_from_ecl_grid
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3 changes: 2 additions & 1 deletion tests/test_grid3d/test_grid_property_grdecl.py
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import hypothesis.strategies as st
import numpy as np
import pytest
import xtgeo
from hypothesis import HealthCheck, assume, given, settings
from numpy.testing import assert_allclose

import xtgeo
from xtgeo.grid3d._gridprop_import_grdecl import read_grdecl_3d_property

from .grid_generator import xtgeo_grids as grids
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1 change: 1 addition & 0 deletions tests/test_grid3d/test_grid_vs_points.py
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Expand Up @@ -2,6 +2,7 @@

import pandas as pd
import pytest

import xtgeo

xtg = xtgeo.common.XTGeoDialog()
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