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Update plotDMN.R
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TuomasBorman authored May 24, 2024
1 parent 13f4ff9 commit 7d3bf44
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion R/plotDMN.R
Original file line number Diff line number Diff line change
Expand Up @@ -55,7 +55,8 @@ setMethod("plotDMNFit", signature = c(x = "SummarizedExperiment"),
dmn <- metadata(x)[[name]]$dmm
} else {
.Deprecated(old="getDMN", new="addCluster",
"Now runDMN and calculateDMN are deprecated. Use addCluster with DMMParam parameter and full parameter set as true instead.")
"Now runDMN and calculateDMN are deprecated. Use addCluster with ",
"DMMParam parameter and full parameter set as true instead.")
dmn <- metadata(x)[[name]]
}
fit_FUN <- mia:::.get_dmn_fit_FUN(type)
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