Replace addTaxonomyTree with addHierarchyTree after renaming the func…

…tion in mia package
microbiome · Feb 29, 2024 · 81ac9fc · 81ac9fc
1 parent adc8e9e
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: miaViz
 Title: Microbiome Analysis Plotting and Visualization
-Version: 1.11.0
+Version: 1.11.1
 Authors@R: 
     c(person(given = "Tuomas", family = "Borman", role = c("aut", "cre"),
              email = "[email protected]",
@@ -62,5 +62,5 @@ Suggests:
     microbiomeDataSets,
     bluster
 Roxygen: list(markdown = TRUE)
-RoxygenNote: 7.2.3
+RoxygenNote: 7.3.1
 VignetteBuilder: knitr
diff --git a/NEWS b/NEWS
@@ -23,3 +23,4 @@ Changes in version 1.9.x
 + Added plotCCA and plotRDA functions
 
 Changes in version 1.11.x
++ replace addTaxonomyTree with addHierarchyTree after renaming in mia package
diff --git a/R/plotTree.R b/R/plotTree.R
@@ -162,7 +162,7 @@
 #'               y
 #'           })
 #' x <- unsplitByRanks(GlobalPatterns)
-#' x <- addTaxonomyTree(x)
+#' x <- addHierarchyTree(x)
 #' 
 #' highlights <- c("Phylum:Firmicutes","Phylum:Bacteroidetes",
 #'                 "Family:Pseudomonadaceae","Order:Bifidobacteriales")

diff --git a/man/miaViz-package.Rd b/man/miaViz-package.Rd
diff --git a/man/plotTree.Rd b/man/plotTree.Rd
Original file line number	Diff line number	Diff line change
Expand Up		@@ -23,3 +23,4 @@ Changes in version 1.9.x
		+ Added plotCCA and plotRDA functions

		Changes in version 1.11.x
		+ replace addTaxonomyTree with addHierarchyTree after renaming in mia package