Fix plotRDA docs

microbiome · Sep 4, 2023 · acdbbaa · acdbbaa
1 parent 0fcff82
commit acdbbaa
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diff --git a/R/plotCCA.R b/R/plotCCA.R
@@ -81,6 +81,11 @@
 #' library(miaViz)
 #' data("enterotype", package = "mia")
 #' tse <- enterotype
+#' 
+#' # Remove missing values from covariables
+#' tse <- tse[ , !is.na(tse$ClinicalStatus)]
+#' tse <- tse[ , !is.na(tse$Age)]
+#' tse <- tse[ , !is.na(tse$Gender)]
 #'  
 #' # Run RDA and store results into TreeSE
 #' tse <- runRDA(tse,

diff --git a/man/plotCCA.Rd b/man/plotCCA.Rd