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replace splitByRanks with agglomerateByRanks #115

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merged 8 commits into from
Jun 28, 2024
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thpralas
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After mia PR microbiome/mia#513 that renamed splitByRanks to agglomerateByRanks and added option as.list to specify whether the result of splitByRanks should be stored in alternative experiments, this PR replaces splitByRanks with agglomerateByRanks in the miaViz package.

@antagomir
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Ok - just resolve conflicts.

Merge branch 'devel' of https://github.com/microbiome/miaViz into agglo_all_ranks

# Conflicts:
#	NEWS
@antagomir
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up

@thpralas
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The tests should pass after pushing mia current version to Bioc devel I think.

@TuomasBorman TuomasBorman merged commit 710316d into devel Jun 28, 2024
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@TuomasBorman TuomasBorman deleted the agglo_all_ranks branch June 28, 2024 12:32
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3 participants