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Add blosc2 to CLI, libcramjam features and own CI #133

Add blosc2 to CLI, libcramjam features and own CI

Add blosc2 to CLI, libcramjam features and own CI #133

Workflow file for this run

name: CI-python
on:
push:
branches:
- master
- 'releases/**'
pull_request:
release:
types:
- released
- prereleased
concurrency:
group: ${{ github.workflow }}-${{ github.ref_name }}-${{ github.event.pull_request.number || github.sha }}
cancel-in-progress: true
jobs:
build-test:
runs-on: ${{ matrix.conf.os }}
name: ${{ matrix.conf.os }}-${{ matrix.conf.target }}-${{ matrix.package.name }}-${{ matrix.python-version }}-${{ matrix.conf.python-architecture }}-${{ matrix.conf.manylinux }}
strategy:
fail-fast: false #${{ !( startsWith(github.ref, 'refs/heads/master') || startsWith(github.ref, 'refs/tags/') ) }}
matrix:
python-version:
- '3.8'
# - '3.9'
# - '3.10'
# - '3.11'
# - '3.12'
package:
- dir: cramjam-python
name: cramjam
- dir: cramjam-cli
name: cramjam-cli
conf:
# - { os: ubuntu-latest, target: x86_64, target-triple: x86_64-unknown-linux-gnu, manylinux: auto }
# - { os: ubuntu-latest, target: x86_64, target-triple: x86_64-unknown-linux-musl, manylinux: musllinux_1_1 }
# - { os: ubuntu-latest, target: i686, target-triple: i686-unknown-linux-gnu, manylinux: auto }
# - { os: ubuntu-latest, target: i686, target-triple: i686-unknown-linux-musl, manylinux: musllinux_1_1 }
# - { os: ubuntu-latest, target: aarch64, target-triple: aarch64-unknown-linux-gnu, manylinux: auto }
# - { os: ubuntu-latest, target: aarch64, target-triple: aarch64-unknown-linux-musl, manylinux: musllinux_1_1 }
# - { os: ubuntu-latest, target: armv7, target-triple: armv7-unknown-linux-gnueabihf, manylinux: auto }
# - { os: ubuntu-latest, target: armv7, target-triple: armv7-unknown-linux-musleabihf, manylinux: musllinux_1_1 }
# - { os: ubuntu-latest, target: s390x, target-triple: s390x-unknown-linux-gnu, manylinux: auto }
# # - { os: ubuntu-latest, target: s390x, target-triple: s390x-unknown-linux-musl, manylinux: musllinux_1_1 } # no target musl for s390x
# - { os: ubuntu-latest, target: ppc64le, target-triple: powerpc64le-unknown-linux-gnu, manylinux: auto }
# # - { os: ubuntu-latest, target: ppc64le, target-triple: powerpc64le-unknown-linux-musleabihf, manylinux: musllinux_1_1 } # no target musl for ppc64le
# - { os: macos-13, target: x86_64, target-triple: x86_64-apple-darwin }
# - { os: macos-13, target: aarch64, target-triple: aarch64-apple-darwin }
# - { os: macos-13, target: universal2, target-triple: x86_64-apple-darwin }
- { os: windows-latest, target: x86_64, target-triple: x86_64-pc-windows-msvc, python-architecture: x64 }
- { os: windows-latest, target: i686, target-triple: i686-pc-windows-msvc, python-architecture: x86 }
# include:
# # Windows x86_64 pypy
# - conf: { os: windows-latest, target: x86_64, target-triple: x86_64-pc-windows-msvc }
# python-version: pypy3.9
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: windows-latest, target: x86_64, target-triple: x86_64-pc-windows-msvc }
# python-version: pypy3.9
# package: { name: cramjam-cli, dir: cramjam-cli }
# - conf: { os: windows-latest, target: x86_64, target-triple: x86_64-pc-windows-msvc }
# python-version: pypy3.10
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: windows-latest, target: x86_64, target-triple: x86_64-pc-windows-msvc }
# python-version: pypy3.10
# package: { name: cramjam-cli, dir: cramjam-cli }
# # Linux x86_64 pypy
# - conf: { os: ubuntu-latest, target: x86_64, target-triple: x86_64-unknown-linux-gnu, manylinux: auto }
# python-version: pypy3.9
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: ubuntu-latest, target: x86_64, target-triple: x86_64-unknown-linux-gnu, manylinux: auto }
# python-version: pypy3.9
# package: { name: cramjam-cli, dir: cramjam-cli }
# - conf: { os: ubuntu-latest, target: x86_64, target-triple: x86_64-unknown-linux-gnu, manylinux: auto }
# python-version: pypy3.10
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: ubuntu-latest, target: x86_64, target-triple: x86_64-unknown-linux-gnu, manylinux: auto }
# python-version: pypy3.10
# package: { name: cramjam-cli, dir: cramjam-cli }
# # Linux arm pypy
# - conf: { os: ubuntu-latest, target: aarch64, target-triple: aarch64-unknown-linux-gnu, manylinux: auto }
# python-version: pypy3.9
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: ubuntu-latest, target: aarch64, target-triple: aarch64-unknown-linux-gnu, manylinux: auto }
# python-version: pypy3.9
# package: { name: cramjam-cli, dir: cramjam-cli }
# - conf: { os: ubuntu-latest, target: aarch64, target-triple: aarch64-unknown-linux-gnu, manylinux: auto }
# python-version: pypy3.10
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: ubuntu-latest, target: aarch64, target-triple: aarch64-unknown-linux-gnu, manylinux: auto }
# python-version: pypy3.10
# package: { name: cramjam-cli, dir: cramjam-cli }
# # OSX x86_64 pypy
# - conf: { os: macos-13, target: x86_64, target-triple: x86_64-apple-darwin }
# python-version: pypy3.9
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: macos-13, target: x86_64, target-triple: x86_64-apple-darwin }
# python-version: pypy3.9
# package: { name: cramjam-cli, dir: cramjam-cli }
# - conf: { os: macos-13, target: x86_64, target-triple: x86_64-apple-darwin }
# python-version: pypy3.10
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: macos-13, target: x86_64, target-triple: x86_64-apple-darwin }
# python-version: pypy3.10
# package: { name: cramjam-cli, dir: cramjam-cli }
# # OSX universal2 pypy
# - conf: { os: macos-13, target: universal2, target-triple: x86_64-apple-darwin }
# python-version: pypy3.9
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: macos-13, target: universal2, target-triple: x86_64-apple-darwin }
# python-version: pypy3.9
# package: { name: cramjam-cli, dir: cramjam-cli }
# - conf: { os: macos-13, target: universal2, target-triple: x86_64-apple-darwin }
# python-version: pypy3.10
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: macos-13, target: universal2, target-triple: x86_64-apple-darwin }
# python-version: pypy3.10
# package: { name: cramjam-cli, dir: cramjam-cli }
# # OSX arm pypy
# - conf: { os: macos-13, target: aarch64, target-triple: aarch64-apple-darwin }
# python-version: pypy3.9
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: macos-13, target: aarch64, target-triple: aarch64-apple-darwin }
# python-version: pypy3.9
# package: { name: cramjam-cli, dir: cramjam-cli }
# - conf: { os: macos-13, target: aarch64, target-triple: aarch64-apple-darwin }
# python-version: pypy3.10
# package: { name: cramjam, dir: cramjam-python }
# - conf: { os: macos-13, target: aarch64, target-triple: aarch64-apple-darwin }
# python-version: pypy3.10
# package: { name: cramjam-cli, dir: cramjam-cli }
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
architecture: ${{ matrix.conf.python-architecture }}
- name: Install Rust toolchain
uses: dtolnay/rust-toolchain@stable
with:
target: ${{ matrix.conf.target-triple }}
# - uses: Swatinem/rust-cache@v2
# name: Rust Cache
# with:
# prefix-key: ${{ matrix.conf.os }}-${{ matrix.conf.manylinux }}-${{ matrix.conf.target-triple }}-${{ matrix.conf.python-architecture }}-${{ matrix.package.name }}
- name: Setup (Mac)
if: runner.os == 'macOS'
run: |
brew install ninja
rustup target add aarch64-apple-darwin
rustup target add x86_64-apple-darwin
echo "MACOSX_DEPLOYMENT_TARGET=10.12" >> $GITHUB_ENV
echo "BLOSC2_INSTALL_PREFIX=$(pwd)/blosc2" >> $GITHUB_ENV
echo "DYLD_FALLBACK_LIBRARY_PATH=$(pwd)/blosc2/lib64:$(pwd)/blosc2/lib" >> $GITHUB_ENV
- name: Setup (Windows)
if: runner.os == 'Windows'
env:
BLOSC2_INSTALL_PREFIX: ${{ github.workspace }}/blosc2
run: |
choco install ninja cmake
rustup target add i686-pc-windows-msvc
echo "BLOSC2_INSTALL_PREFIX=$Env:BLOSC2_INSTALL_PREFIX" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
$Env:PATH += ";$Env:BLOSC2_INSTALL_PREFIX\lib;$Env:BLOSC2_INSTALL_PREFIX\lib64;$Env:BLOSC2_INSTALL_PREFIX\bin"
echo "PATH=$Env:PATH" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
$Env:LIBPATH += ";$Env:BLOSC2_INSTALL_PREFIX\lib;$Env:BLOSC2_INSTALL_PREFIX\lib64;$Env:BLOSC2_INSTALL_PREFIX\bin"
echo "LIBPATH=$Env:LIBPATH" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
$Env:LIB += ";$Env:BLOSC2_INSTALL_PREFIX\lib;$Env:BLOSC2_INSTALL_PREFIX\lib64;$Env:BLOSC2_INSTALL_PREFIX\bin"
echo "LIB=$Env:LIB" | Out-File -FilePath $Env:GITHUB_ENV -Encoding utf8 -Append
# Now just build blosc2-sys to ensure caching doesn't get in the way and sanity purposes
# cargo build --release --target ${{ matrix.conf.target-triple }} --package blosc2-sys --target-dir build -vv
- name: Setup (Linux)
if: runner.os == 'Linux'
env:
TARGET_TRIPLE: ${{ matrix.conf.target-triple }}
WORKSPACE: ${{ github.workspace }}
BLOSC2_INSTALL_PREFIX: ${{ github.workspace }}/blosc2
run: |
sudo apt update
sudo apt install ninja-build -y
echo "BLOSC2_INSTALL_PREFIX=$BLOSC2_INSTALL_PREFIX" >> $GITHUB_ENV
echo "LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$BLOSC2_INSTALL_PREFIX/lib:$BLOSC2_INSTALL_PREFIX/lib64" >> $GITHUB_ENV
# maturin action fails building blosc2 for armv7 and aarch64
# so we'll just use 'cross' to build and pass it in for the action for all archs
# nothing special for the revision pin, just deterministic install
cargo install cross --git https://github.com/cross-rs/cross --rev 6d097fb
cross build --release --target $TARGET_TRIPLE --package blosc2-sys --target-dir build --manifest-path ${{ matrix.package.dir }}/Cargo.toml
blosc2_sys_dir=$(ls build/$TARGET_TRIPLE/release/build/ | grep blosc2-sys)
mv $WORKSPACE/build/$TARGET_TRIPLE/release/build/$blosc2_sys_dir/out $BLOSC2_INSTALL_PREFIX
tree -L 2 $BLOSC2_INSTALL_PREFIX
- name: Rust Tests
if: matrix.conf.target == 'x86_64' && !startsWith(matrix.python-version, 'pypy') && matrix.python-version == '3.12'
run: cargo test -p ${{ matrix.package.dir }}
- name: Build wheel (Linux)
if: runner.os == 'Linux'
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.conf.target }}
manylinux: ${{ matrix.conf.manylinux }}
docker-options: -e BLOSC2_INSTALL_PREFIX=${{ github.workspace }}/blosc2 -e LD_LIBRARY_PATH=${{ github.workspace }}/blosc2/lib:${{ github.workspace }}/blosc2/lib64
args: -i ${{ matrix.python-version }} --release --out dist --manifest-path ${{ matrix.package.dir }}/Cargo.toml --features use-system-blosc2
before-script-linux: ls -l $BLOSC2_INSTALL_PREFIX
- name: Build wheel (Windows)
if: runner.os == 'Windows'
shell: bash
run: |
python -m pip install maturin delvewheel
maturin build \
-i python \
--release \
--out wheels \
--target ${{ matrix.conf.target-triple }} \
--no-default-features \
--features extension-module \
--features blosc2-static \
--manifest-path ${{ matrix.package.dir }}/Cargo.toml
name=$(ls -1 wheels/ | head -n 1)
delvewheel repair -v wheels/$name -w dist
# Repair wheel
# $file = Get-ChildItem -Path ".\wheels\" -Filter "*.whl" | Select-Object -First 1
# if ($file -ne $null) {
# & delvewheel repair -v $file.FullName -w dist
# } else {
# Write-Host "No .whl file found in the wheels directory."
# }
# # Remove location of blosc2 to ensure fixing wheel works
# Remove-Item -Path $env:BLOSC2_INSTALL_PREFIX -Recurse -Force -ErrorAction SilentlyContinue
- name: Build wheel (MacOS)
if: runner.os == 'macOS'
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.conf.target-triple }}
# OSX complains with __cpu_model from blosc2 statically compiled so only enabled shared
args: -i python --release --out dist --manifest-path ${{ matrix.package.dir }}/Cargo.toml --no-default-features --features extension-module --features blosc2-shared
- name: Fix wheel (MacOS)
if: runner.os == 'macOS'
run: |
python -m pip install delocate
delocate-wheel -v dist/*.whl
# Remove pointers back to built lib location to ensure tests later don't link back
unset DYLD_FALLBACK_LIBRARY_PATH
unset BLOSC2_INSTALL_PREFIX
rm -rf $BLOSC2_INSTALL_PREFIX
- name: Install built wheel and Test (Native)
# TODO: I'm not sure but the actual collection of tests on windows using pypy3.10 takes forever and/or fails
if: |
!startsWith(matrix.conf.manylinux, 'musl') &&
!( matrix.python-version == 'pypy3.10' && runner.os == 'Windows' ) &&
( matrix.conf.target == 'x86_64' || matrix.conf.target == 'universal2' )
run: |
# TODO: Remove after next release of cramjam-cli
python -m pip install pytest-benchmark cramjam
# Second install guarantees it's going to install from local dir w/ --no-index
# use first to get in dev dependencies
python -m pip install ${{ matrix.package.name }}[dev] --pre --find-links dist --force-reinstall
python -m pip install ${{ matrix.package.name }} --pre --no-index --find-links dist --force-reinstall
python -m pytest ${{ matrix.package.dir }} -vs --benchmark-skip
# Could use 'distro: alpine_latest' in 'run-on-arch-action' but seems difficult to install a specific version of python
# so we'll just use existing python alpine images to test import and cli use w/o testing archs other than x86_64
- name: Install built wheel and Test (musllinux)
if: startsWith(matrix.conf.manylinux, 'musl') && matrix.conf.target == 'x86_64'
run: |
if [ "${{ matrix.package.name }}" = "cramjam" ]; then
docker run \
-v $(pwd)/dist:/wheels \
--rm python:${{ matrix.python-version }}-alpine sh \
-c "pip install ${{ matrix.package.name }} --no-index --find-links /wheels && python -c 'import cramjam'"
else
docker run \
-v $(pwd)/dist:/wheels \
--rm python:${{ matrix.python-version }}-alpine sh \
-c "pip install ${{ matrix.package.name }} --no-index --find-links /wheels && cramjam-cli --help"
fi
- name: Install built wheel and Test (Cross)
if: |
!startsWith(matrix.conf.manylinux, 'musl') &&
runner.os == 'Linux' &&
!startsWith(matrix.python-version, 'pypy') &&
contains(fromJson('["armv6", "armv7", "aarch64", "riscv64", "s390x", "ppc64le"]'), matrix.conf.target)
uses: uraimo/[email protected]
with:
arch: ${{ matrix.conf.target }}
distro: ubuntu20.04
githubToken: ${{ github.token }}
# Mount the dist directory as /artifacts in the container
dockerRunArgs: |
--volume "${PWD}/dist:/artifacts"
install: |
apt-get update
apt-get install -y --no-install-recommends python3 python3-venv software-properties-common
add-apt-repository ppa:deadsnakes/ppa
apt-get update
apt-get install -y curl python${{ matrix.python-version }}-venv
run: |
ls -lrth /artifacts
PYTHON=python${{ matrix.python-version }}
$PYTHON -m venv venv
venv/bin/pip install -U pip
venv/bin/pip install ${{ matrix.package.name }} --pre --no-index --find-links /artifacts --force-reinstall
venv/bin/python -c 'import cramjam' || venv/bin/cramjam-cli --help
- name: Upload wheels
uses: actions/upload-artifact@v4
with:
name: dist
path: dist
overwrite: true
build-sdist:
name: Build sdists
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3.12
- name: Build sdist cramjam
run: |
pip install build
python -m build --sdist cramjam-python/ -o ./dist
- name: Build sdist cramjam-cli
run: python -m build --sdist cramjam-cli/ -o ./dist
- name: Upload sdists
uses: actions/upload-artifact@v4
with:
name: dist
path: dist
pypi-publish:
name: Upload ${{ matrix.package }} release to PyPI
strategy:
fail-fast: false
matrix:
package:
- cramjam
- cramjam-cli
runs-on: ubuntu-latest
if: startsWith(github.ref, 'refs/tags/')
needs: [build-test, build-sdist]
environment:
name: pypi
url: https://pypi.org/p/${{ matrix.package }}
permissions:
id-token: write
steps:
- uses: actions/download-artifact@v3
with:
name: dist
- name: Separate packages into directories
run: |
ls -l
mkdir artifacts-cramjam-cli
mv cramjam_cli* artifacts-cramjam-cli/
ls -l artifacts-cramjam-cli/
mkdir artifacts-cramjam
mv cramjam* artifacts-cramjam/
ls -l artifacts-cramjam/
ls -l
- name: Publish package distributions to PyPI
uses: pypa/gh-action-pypi-publish@release/v1
with:
skip-existing: true
packages-dir: artifacts-${{ matrix.package }}/