Fix cloning, compilation and linking errors for the non-docker version

.gitignore

@@ -462,3 +462,6 @@ MigrationBackup/
 
 # End of https://www.toptal.com/developers/gitignore/api/clion,visualstudio
 /CMakeSettings.json
+
+# Build directory
+build/

.gitmodules

@@ -1,9 +1,12 @@
-[submodule "third_parties/googletest"]
-	path = third_parties/googletest
-	url = https://github.com/google/googletest.git
+[submodule "third_parties/fmt"]
+	path = third_parties/fmt
+	url = https://github.com/fmtlib/fmt.git
 [submodule "third_parties/mp11"]
 	path = third_parties/mp11
-	url = git@github.com:mis-wut/mp11.git
+	url = https://github.com/boostorg/mp11.git
 [submodule "third_parties/CLI11"]
 	path = third_parties/CLI11
 	url = https://github.com/CLIUtils/CLI11.git
+[submodule "third_parties/googletest"]
+	path = third_parties/googletest
+	url = https://github.com/google/googletest

CMakeLists.txt

@@ -3,29 +3,22 @@ set(CMAKE_VERBOSE_MAKEFILE ON)
 
 project(meta-json-parser VERSION 0.1 LANGUAGES CXX CUDA)
 
-find_package(CUDAToolkit 10.0 REQUIRED)
+# As of now not using LIBCUDF throws
+set(USE_LIBCUDF 1)
 
-IF(NOT LOCAL_LIB)
-find_package(Boost 1.75)  # version 1.75 is required to use boost::mp11::mp_pairwise_fold_q
-ENDIF()
+find_package(CUDAToolkit EXACT 11.8 REQUIRED)
 
-IF(NOT Boost_FOUND)
-    add_subdirectory(third_parties/mp11)
-    add_library(Boost::boost ALIAS boost_mp11)
-ENDIF()
-
-IF(NOT LOCAL_LIB)
-find_package(GTest REQUIRED CONFIG)
-ENDIF()
-
-IF(NOT GTest_FOUND)
-    add_subdirectory(third_parties/googletest)
-    add_library(GTest::gtest ALIAS gtest)
-    add_library(GTest::gmock ALIAS gmock)
-ENDIF()
+# Add Boost MP11 library
+add_subdirectory(third_parties/mp11)
+add_library(Boost::boost ALIAS boost_mp11)
 
+# Add GoogleTest
+add_subdirectory(third_parties/googletest)
 include(GoogleTest)
 
+#Add FMT library (as CUDA11.8 doesn't support gcc12)
+add_subdirectory(third_parties/fmt)
+
 add_library(lib-meta-json-parser INTERFACE)
 
 target_compile_features(lib-meta-json-parser INTERFACE cxx_std_17 cuda_std_17)
@@ -113,6 +106,7 @@ target_link_libraries(meta-cudf-parser-1 PUBLIC lib-meta-json-parser)
 
 target_include_directories(meta-cudf-parser-1 PUBLIC
     "${PROJECT_SOURCE_DIR}/meta_cudf/opt1"
+    "$ENV{CONDA_PREFIX}/include"
 )
 target_compile_options(meta-cudf-parser-1 PRIVATE $<$<COMPILE_LANGUAGE:CUDA>:--expt-relaxed-constexpr> $<$<COMPILE_LANGUAGE:CUDA>:--extended-lambda>)
 
@@ -182,7 +176,7 @@ add_subdirectory(third_parties/CLI11)
 #add_executable(meta-json-parser-benchmark benchmark/checkpoint_results.cpp benchmark/checkpoint_results.h)
 add_executable(meta-json-parser-benchmark)
 
-target_link_libraries(meta-json-parser-benchmark PRIVATE lib-meta-json-parser CLI11)
+target_link_libraries(meta-json-parser-benchmark PRIVATE lib-meta-json-parser fmt::fmt CLI11)
 
 # libcudf is an optional dependency for meta-json-parser-benchmark
 # run cmake with -DUSE_LIBCUDF=1 to enable it
@@ -192,33 +186,34 @@ if (USE_LIBCUDF)
     #       instead of hardcoding paths to includes and to libraries, like below
     target_include_directories(meta-cudf-parser-1 PUBLIC
                                /usr/local/include
-                               /usr/local/include/libcudf/libcudacxx
+                               $ENV{CONDA_PREFIX}/include
     )
     target_include_directories(meta-cudf-parser-1 AFTER PUBLIC
-                               /opt/conda/envs/rapids/include
+        $ENV{CONDA_PREFIX}/include
     )
     target_link_libraries(meta-cudf-parser-1 PRIVATE
                           cudf
                           -L/usr/local/cuda/lib64 -L/usr/local/lib
-                          -L/opt/conda/envs/rapids/lib
+                          -L$ENV{CONDA_PREFIX}/lib
     )
     target_compile_definitions(meta-cudf-parser-1 PRIVATE
                                HAVE_LIBCUDF=1
     )
 
     target_include_directories(meta-json-parser-benchmark PUBLIC
                                /usr/local/include
-                               /usr/local/include/libcudf/libcudacxx
+                               $ENV{CONDA_PREFIX}/include
     )
+
     # NOTE: needs to be added as the last directory to be checked, because
     # it can contain outdated Boost library (which in Ubuntu 20.04 is Boost 1.72)
     target_include_directories(meta-json-parser-benchmark AFTER PUBLIC
-                               /opt/conda/envs/rapids/include
+        $ENV{CONDA_PREFIX}/include
     )
     target_link_libraries(meta-json-parser-benchmark PRIVATE
                           cudf
                           -L/usr/local/cuda/lib64 -L/usr/local/lib
-                          -L/opt/conda/envs/rapids/lib
+                          -L$ENV{CONDA_PREFIX}/lib
     )
     target_compile_definitions(meta-json-parser-benchmark PRIVATE
                                HAVE_LIBCUDF=1

include/meta_json_parser/debug_helpers.cpp

@@ -192,7 +192,7 @@ void describe_table(cudf::io::table_with_metadata& table_with_metadata, bool dum
 	printf("table (with metadata) has %d columns\n", n_cols);
 	for (int col_idx = 0; col_idx < n_cols; col_idx++) {
 		printf("column(%d) name is \"%s\":\n", col_idx,
-		       table_with_metadata.metadata.column_names[col_idx].c_str());
+		       table_with_metadata.metadata.schema_info[col_idx].name.c_str());
 		describe_column(table.column(col_idx), dump_data);
     }
 }

include/meta_json_parser/parser_output_host.cuh

@@ -1,7 +1,6 @@
 #pragma once 
 #include <cuda_runtime_api.h>
 #include <thrust/host_vector.h>
-#include <thrust/system/cuda/experimental/pinned_allocator.h>
 #include <boost/mp11/list.hpp>
 #include <fstream>
 #include <meta_json_parser/config.h>

meta_cudf/parser.cu

@@ -257,7 +257,8 @@ cudf::io::table_with_metadata generate_example_metadata(const char* filename, in
         return "Column " + to_string(i++);
     });
 
-    cudf::io::table_metadata metadata{column_names};
+    cudf::io::table_metadata metadata;
+    std::for_each(begin(column_names), end(column_names), [&](auto& elem){metadata.schema_info.push_back({elem});});
 
     return cudf::io::table_with_metadata{
         make_unique<cudf::table>(cudf_table),