Updates QC stats, fixes orthology counts, adds phenocubes & phenocube report #628
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Fixes counts in orthology coverage table so that it's the number of genes on each side with an ortholog, not the number of orthology pairs being counted. Adds an output table for gene -> ortholog -> species_specific_phentoype -> human-henotype, plus a summarization of it, using upheno siblinghood to traverse the phenotype to phenotype association.