Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

VBO November release #206

Merged
merged 1 commit into from
Nov 6, 2024
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion src/ontology/components/catbreeds.tsv
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
vbo_id term_label to_be_ignored breed_name_to_be_used_for_label species_to_be_used_for_label internal_term_merge_indicator_vboid_into_vboid internal_date_and_issue_separated_by_pipe_yymmdd_dash_issue gh_issue_NOT_merge_obsolete parent_ID source_for_parents source_for_parents parent_ID source_for_parents source_for_parents most_common_name synonym_type_most_common_name source_for_most_common_name source_for_most_common_name synonym_dadis_name_not_used_in_label source_for_synonym_dadis source_for_synonym_dadis synonym_1 source_for_synonym_1 source_for_synonym_1 synonym_2 source_for_synonym_2 source_for_synonym_2 synonym_3 source_for_synonym_3 source_for_synonym_3 synonym_4 source_for_synonym_4 source_for_synonym_4 synonym_related_1 source_for_synonym_1 synonym_related_2 source_for_synonym_2 synonym_related_3 source_for_synonym_3 synonym_label_from_merged_term source_for_merged_term Breed_code_1 all_source_for_breed_code_1_separated_by_pipe all_source_for_breed_code_1_separated_by_pipe Breed_code_2 all_source_for_breed_code_2_separated_by_pipe all_source_for_breed_code_2_separated_by_pipe Breed_code_3 all_source_for_breed_code_3_separated_by_pipe all_source_for_breed_code_3_separated_by_pipe Breed_code_4 all_source_for_breed_code_4_separated_by_pipe all_source_for_breed_code_4_separated_by_pipe definition definition_xref definition_xref xref1 source_for_xref1 source_for_xref1 xref2 source_for_xref2 source_for_xref2 omia_xref_internal recognition_status_1 source_for_recognition_status_1 source_for_recognition_status_1 recognition_status_2 source_for_recognition_status_2 source_for_recognition_status_2 recognition_status_3 source_for_recognition_status_3 source_for_recognition_status_3 source_for_breed_CFA source_for_breed_FIFe source_for_breed_GCCF source_for_breed_OMIA source_for_breed_REFR source_for_breed_TICA source_for_breed_WCC source_for_breed_WCF source_for_breed_WIKI source_for_breed_OTHER source_for_breed contributors contributors comment general_comment comment_from_obsoletion description_of_origin source_for_description_of_origin source_for_description_of_origin domestication_status source_for_domestication_status wikidata_link_for_the_country_exists_in_country_subclass source_for_country_subclass source_for_country_subclass obsoletion_type obsolete replacement_term consider replacement_label comment GH_issue obsolescence_reason curator_note foundation_stock_label_1 foundation_stock_relation_1 source_1_has_foundation_stock source_1_has_foundation_stock foundation_stock_label_2 foundation_stock_relation_2 source_2_has_foundation_stock source_2_has_foundation_stock foundation_stock_label_3 foundation_stock_relation_3 source_3_has_foundation_stock source_3_has_foundation_stock foundation_stock_label_4 foundation_stock_relation_4 source_4_has_foundation_stock source_4_has_foundation_stock foundation_stock_relation_5 foundation_stock_label_5 source_5_has_foundation_stock source_5_has_foundation_stock foundation_stock_label_6 foundation_stock_relation_6 source_6_has_foundation_stock source_6_has_foundation_stock
ID LABEL AT IAO:0000233^^xsd:anyURI SPLIT=| SC % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AI oboInOwl:hasSynonymType >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasExactSynonym >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A IAO:0000115 >AT oboInOwl:hasDbXref^^xsd:anyURI SPLIT=| >A oboInOwl:hasDbXref SPLIT=| A oboInOwl:hasDbXref SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasDbXref SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI A dc:source SPLIT=| AI dc:contributor SPLIT=| AI dc:contributor SPLIT=| A rdfs:comment A http://purl.obolibrary.org/obo/vbo#origindescription >AT oboInOwl:source^^xsd:anyURI >A oboInOwl:source AI http://purl.obolibrary.org/obo/vbo#hasdomesticationstatus >AT oboInOwl:source^^xsd:anyURI SC 'located in' value % >AT oboInOwl:source^^xsd:anyURI >A oboInOwl:source TYPE AT owl:deprecated^^xsd:boolean AI IAO:0100001 AI http://www.geneontology.org/formats/oboInOwl#consider AT IAO:0000233^^xsd:anyURI A IAO:0000231 SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=|
ID LABEL AT IAO:0000233^^xsd:anyURI SPLIT=| SC % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AI oboInOwl:hasSynonymType >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasExactSynonym >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A IAO:0000115 >AT oboInOwl:hasDbXref^^xsd:anyURI SPLIT=| >A oboInOwl:hasDbXref SPLIT=| A oboInOwl:hasDbXref SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasDbXref SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI A dc:source SPLIT=| AI dc:contributor SPLIT=| AI dc:contributor SPLIT=| A rdfs:comment A http://purl.obolibrary.org/obo/vbo#origindescription >AT oboInOwl:source^^xsd:anyURI >A oboInOwl:source AI http://purl.obolibrary.org/obo/vbo#hasdomesticationstatus >AT oboInOwl:source^^xsd:anyURI SC 'located in' value % >AT oboInOwl:source^^xsd:anyURI >A oboInOwl:source TYPE AT owl:deprecated^^xsd:boolean AI IAO:0100001 AI http://www.geneontology.org/formats/oboInOwl#consider AT IAO:0000233^^xsd:anyURI A IAO:0000231 SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=|
VBO:0100120 obsolete Household Pet (Cat) Household Pet Cat 240828-65 https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153 Household Pet http://purl.obolibrary.org/obo/vbo#most_common_name https://www.tica.org/breeds/browse-all-breeds|https://cfa.org/showing-a-household-pet/ HH https://www.tica.org/phocadownload/hh.pdf VBO:0300004 https://www.tica.org/breeds/browse-all-breeds https://cfa.org/showing-a-household-pet/ https://www.tica.org/breeds/browse-all-breeds https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153|https://orcid.org/0000-0002-5520-6597|https://orcid.org/0000-0002-9178-3965 Out of scope. Consider VBO:0100262 'Mixed Breed (Cat)' owl:Class true VBO:0100262 https://github.com/monarch-initiative/vertebrate-breed-ontology/issues/65 OMO:0001000
VBO:0100121 obsolete Household Pet Kitten (Cat) Household Pet Kitten Cat 240828-65 https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153 Household Pet Kitten http://purl.obolibrary.org/obo/vbo#most_common_name https://www.tica.org/breeds/browse-all-breeds HH https://www.tica.org/phocadownload/hh.pdf VBO:0300004 https://www.tica.org/breeds/browse-all-breeds https://www.tica.org/breeds/browse-all-breeds https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153|https://orcid.org/0000-0002-5520-6597|https://orcid.org/0000-0002-9178-3965 Out of scope. Consider VBO:0100262 'Mixed Breed (Cat)' owl:Class true VBO:0100262 https://github.com/monarch-initiative/vertebrate-breed-ontology/issues/65 OMO:0001000
VBO:0100122 obsolete Household Pet Longhair (Cat) Household Pet Longhair Cat 240828-65 https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153 Household Pet Longhair http://purl.obolibrary.org/obo/vbo#most_common_name https://wcf.de/en/wcf-ems-code/ HPL https://wcf.de/en/wcf-ems-code/ VBO:0300004 https://wcf.de/en/wcf-ems-code/ https://wcf.de/en/wcf-ems-code/ https://orcid.org/0000-0002-1628-7726 https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153|https://orcid.org/0000-0002-5520-6597|https://orcid.org/0000-0002-9178-3965 Out of scope. Consider VBO:0100118 'Domestic Longhair (Cat)' owl:Class true VBO:0100118 https://github.com/monarch-initiative/vertebrate-breed-ontology/issues/65 OMO:0001000
Expand Down
Loading
Loading