just rename models as models/example-models/ (#15)

mxochicale · Sep 30, 2023 · d85422f · d85422f
1 parent b62e8f1
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diff --git a/dependencies/ve.yml b/dependencies/ve.yml
@@ -26,10 +26,11 @@ dependencies:
      - matplotlib
      - numpy
      - jupyter
+     #- jupyter_contrib_nbextensions #>>> jupyter nbextensions_configurator enable
+     - notebook
      - pandas
      - seaborn
      - scikit-image
-     - notebook
      - thread6 
      - pydot
      - scikit-learn

diff --git a/rtt4ssa/models/README.md b/rtt4ssa/models/README.md
@@ -1,4 +1,13 @@
 # Models
 
-* Transformer models
+## Running notebooks
+```
+cd $HOME/repositories/rtt4ssa/rtt4ssa/models
+export PYTHONPATH="${PYTHONPATH}:$HOME/repositories/rtt4ssa"
+mamba activate rtt4ssaVE && jupyter notebook --browser=firefox
+```
+
+## Content 
+* Example models
+* Transformer-based models
 
diff --git a/...eseries_classification_from_scratch.ipynb → ...eseries_classification_from_scratch.ipynb b/...eseries_classification_from_scratch.ipynb → ...eseries_classification_from_scratch.ipynb
@@ -43,21 +43,11 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 1,
+   "execution_count": 12,
    "metadata": {
     "id": "vSMYnBXvh8zq"
    },
-   "outputs": [
-    {
-     "name": "stderr",
-     "output_type": "stream",
-     "text": [
-      "2023-08-09 07:59:07.703295: I tensorflow/core/util/port.cc:110] oneDNN custom operations are on. You may see slightly different numerical results due to floating-point round-off errors from different computation orders. To turn them off, set the environment variable `TF_ENABLE_ONEDNN_OPTS=0`.\n",
-      "2023-08-09 07:59:07.752323: I tensorflow/core/platform/cpu_feature_guard.cc:182] This TensorFlow binary is optimized to use available CPU instructions in performance-critical operations.\n",
-      "To enable the following instructions: SSE4.1 SSE4.2 AVX AVX2 AVX_VNNI FMA, in other operations, rebuild TensorFlow with the appropriate compiler flags.\n"
-     ]
-    }
-   ],
+   "outputs": [],
    "source": [
     "from tensorflow import keras\n",
     "import numpy as np\n",
@@ -104,7 +94,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": 3,
    "metadata": {
     "id": "q4WhCJC0h8zu"
    },
@@ -137,7 +127,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
@@ -196,7 +186,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 4,
+   "execution_count": 5,
    "metadata": {
     "id": "WxQZPakth8zw"
    },
@@ -325,7 +315,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 5,
+   "execution_count": 6,
    "metadata": {
     "id": "8RKhPnTmh8zy"
    },
@@ -361,7 +351,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 6,
+   "execution_count": 7,
    "metadata": {
     "id": "0pNBqQ-Gh8zz"
    },
@@ -393,7 +383,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 7,
+   "execution_count": 8,
    "metadata": {
     "id": "yq23pCEXh8zz"
    },
@@ -416,7 +406,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 8,
+   "execution_count": 9,
    "metadata": {
     "id": "IP3XNJXth8z0"
    },
@@ -444,7 +434,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 9,
+   "execution_count": 10,
    "metadata": {
     "id": "xqc5-9deh8z0"
    },
@@ -477,7 +467,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 10,
+   "execution_count": 11,
    "metadata": {},
    "outputs": [
     {
@@ -492,16 +482,16 @@
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "2023-08-09 07:59:39.743405: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:39.839564: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:39.839929: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:39.843192: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:39.843559: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:39.843807: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:40.445007: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:40.445267: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:40.445411: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
-      "2023-08-09 07:59:40.445534: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1635] Created device /job:localhost/replica:0/task:0/device:GPU:0 with 6202 MB memory:  -> device: 0, name: NVIDIA RTX A2000 8GB Laptop GPU, pci bus id: 0000:01:00.0, compute capability: 8.6\n"
+      "2023-09-30 03:15:35.125892: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.160165: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.160437: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.165051: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.165365: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.165562: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.763479: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.763786: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.763959: I tensorflow/compiler/xla/stream_executor/cuda/cuda_gpu_executor.cc:996] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero. See more at https://github.com/torvalds/linux/blob/v6.0/Documentation/ABI/testing/sysfs-bus-pci#L344-L355\n",
+      "2023-09-30 03:15:35.764107: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1635] Created device /job:localhost/replica:0/task:0/device:GPU:0 with 6202 MB memory:  -> device: 0, name: NVIDIA RTX A2000 8GB Laptop GPU, pci bus id: 0000:01:00.0, compute capability: 8.6\n"
      ]
     },
     {
@@ -518,7 +508,7 @@
        "<IPython.core.display.Image object>"
       ]
      },
-     "execution_count": 10,
+     "execution_count": 11,
      "metadata": {},
      "output_type": "execute_result"
     }

diff --git a/rtt4ssa/models/example-models/timeseries_transformer_classification.ipynb b/rtt4ssa/models/example-models/timeseries_transformer_classification.ipynb
diff --git a/rtt4ssa/models/transformer-model/timeseries_transformer_classification.ipynb b/rtt4ssa/models/transformer-model/timeseries_transformer_classification.ipynb