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nearinj committed Dec 9, 2021
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### Comparison of microbiome differential abundance methods

The code and key intermediate files in this repository correspond to our manuscript:
The code and key intermediate files in this repository correspond to the following manuscript:

_Nearing et al. In Prep. Microbiome differential abundance methods produce different results across 38 datasets._
_Nearing, Douglas et al. Nature Comm. Microbiome differential abundance methods produce different results across 38 datasets._

Our goal with this work was to compare how similarly common DA methods perform on a range of 16S rRNA gene datasets.
Accordingly for the majority of this work we don't necessarily know the _right_ answer: we can mainly just say which tools are more similar to others.
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