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update institution profile for KU_SUND_DANGPU #533

Merged
merged 18 commits into from
Aug 17, 2023
Merged

update institution profile for KU_SUND_DANGPU #533

merged 18 commits into from
Aug 17, 2023

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AdrijaK
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@AdrijaK AdrijaK commented Aug 9, 2023 •
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name: Updated Config
about: Updated cluster config

Please follow these steps before submitting your PR:

  • If your PR is a work in progress, include [WIP] in its title
  • Your PR targets the master branch
  • You've included links to relevant issues, if any
  • Requested review from @nf-core/maintainers and/or #request-review on slack

Steps for adding a new config profile:

  • Add your custom config file to the conf/ directory
  • Add your documentation file to the docs/ directory
  • Add your custom profile to the nfcore_custom.config file in the top-level directory
  • Add your custom profile to the README.md file in the top-level directory
  • Add your profile name to the profile: scope in .github/workflows/main.yml

@AdrijaK
update nextflow version
badc279 
nextflow/22.10.6
@AdrijaK
add tmux instructions
9329abc
@AdrijaK
fix typos
bddb5d0
@AdrijaK
update rnaseq pipeline
9e79541
@AdrijaK
change tmp to temp
540fb7d 
tmp does not have write persmissions for many users, so change to temp.
@AdrijaK
add --input to rnaseq pipeline
cd20b8d 
add a css file to input requirements when running a pipeline example
@AdrijaK
add nf-core module
c57b76e 
module load dangpu_libs python/3.7.13 nf-core/2.7.2
@AdrijaK
add explanation for -r parameter
e99a751
@AdrijaK
fix typo
e467acb
@AdrijaK
Merge branch 'nf-core:master' into master
a946786
@AdrijaK
Update ku_sund_dangpu.config
4f03f9c 
update queue size
@AdrijaK
Update ku_sund_dangpu.md
86385c0 
update docs
@AdrijaK
Update ku_sund_dangpu.md
72444ba 
update docs
mashehu
mashehu reviewed Aug 9, 2023
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AdrijaK and others added 3 commits August 9, 2023 12:03
@AdrijaK @mashehu
Update docs/ku_sund_dangpu.md
21b5b5c 
Co-authored-by: Matthias Hörtenhuber <[email protected]>
@AdrijaK @mashehu
Update docs/ku_sund_dangpu.md
01b1ee6 
Co-authored-by: Matthias Hörtenhuber <[email protected]>
@AdrijaK @mashehu
Update docs/ku_sund_dangpu.md
e8ec1e8 
Co-authored-by: Matthias Hörtenhuber <[email protected]>
@matq007
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matq007 commented Aug 10, 2023

@nf-core-bot fix linting

matq007
matq007 approved these changes Aug 10, 2023
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LGTM

@AdrijaK AdrijaK merged commit 41fe4d0 into nf-core:master Aug 17, 2023
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@matq007 matq007 matq007 approved these changes

@nf-core-bot nf-core-bot Awaiting requested review from nf-core-bot

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@AdrijaK @matq007 @mashehu @nf-core-bot